KEGG   Escherichia coli K-12 DH10B: ECDH10B_2925
Entry
ECDH10B_2925      CDS       T00666                                 
Symbol
ygcI
Name
(GenBank) predicted protein
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
ecd  Escherichia coli K-12 DH10B
Brite
KEGG Orthology (KO) [BR:ecd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecd02048]
    ECDH10B_2925 (ygcI)
Prokaryotic defense system [BR:ecd02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    ECDH10B_2925 (ygcI)
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: ACB03874
LinkDB
Position
complement(2970938..2971612)
AA seq 224 aa
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSES
VQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVAL
WLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGD
IYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
NT seq 675 nt   +upstreamnt  +downstreamnt
atgagatcttatttgatcttgcggcttgctgggccaatgcaagcctgggggcagccgacc
tttgaaggaacgcgacctaccggaagatttccgacccgaagcgggttattagggctactc
ggggcttgtcttgggatccaacgtgatgatacttcttcattacaggcgttatcagagagt
gtgcaatttgcagtgcgctgcgatgaactcattcttgacgatcgtcgtgtgtctgtaacg
gggttgcgtgattaccatacagtccttggagcgcgagaagattaccgtggtttgaaaagt
catgaaacgattcaaacatggcgcgaatatttatgtgatgcctcctttaccgtcgctctc
tggttaacaccccatgcaacgatggttatctcagaacttgaaaaagcagtattaaagcct
cggtatacaccttacctggggcggagaagttgcccactaacacacccgctttttttgggg
acatgtcaggcatcggatcctcagaaggcgctattaaattatgagcccgttggcggcgat
atatatagtgaggaatcagttacagggcatcatttaaaatttacggcgcgcgacgaaccg
atgatcaccttgcctcgacaatttgcttcccgagaatggtatgtgattaaaggaggtatg
gatgtatctcagtaa

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