Escherichia coli K-12 DH10B: ECDH10B_2944
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Entry
ECDH10B_2944 CDS
T00666
Symbol
ygcF
Name
(GenBank) conserved protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ecd
Escherichia coli K-12 DH10B
Pathway
ecd00790
Folate biosynthesis
ecd01100
Metabolic pathways
Module
ecd_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ecd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
ECDH10B_2944 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecd03016
]
ECDH10B_2944 (ygcF)
Enzymes [BR:
ecd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
ECDH10B_2944 (ygcF)
Transfer RNA biogenesis [BR:
ecd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
ECDH10B_2944 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ACB03892
LinkDB
All DBs
Position
complement(2995311..2995982)
Genome browser
AA seq
223 aa
AA seq
DB search
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAK
TKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETS
GTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTD
DKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgattaacgagatgttccagaccctgcaaggtgagggttactttaccggc
gttcccgccatttttattcgtttacagggatgcccggttggctgtgcctggtgcgacacc
aaacacacctgggaaaagcttgaggatcgggaagtctcccttttcagcattctggcgaag
accaaagagagtgataagtggggggctgcgagcagtgaagatttgctggctgtcattggt
cgccagggatacaccgcgcggcatgtggtgattacgggtggtgagccttgcattcatgat
ttgctgccactgactgatctgctcgaaaagaacggttttagctgccagatcgaaaccagt
ggtactcatgaggtacgctgcacaccgaatacctgggttaccgtatcgccaaagctgaac
atgcgcggcggctatgaagtgttgtcacaggcactggagcgagccaacgaaatcaagcat
ccagtggggcgcgtacgcgatattgaagcactggatgaactactggcaacgctgaccgat
gataaaccgcgagtcattgcactgcagccgattagccaaaaggatgatgccacacgtttg
tgcattgaaacctgcattgcgcgtaattggcgtttgtcgatgcaaacacataaatatcta
aatattgcctga
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