KEGG   Escherichia coli O157 H7 EDL933 (EHEC): Z1833
Entry
Z1833             CDS       T00044                                 
Symbol
ycfD
Name
(GenBank) orf, hypothetical protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
ece  Escherichia coli O157:H7 EDL933 (EHEC)
Brite
KEGG Orthology (KO) [BR:ece00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ece03009]
    Z1833 (ycfD)
Enzymes [BR:ece01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     Z1833 (ycfD)
Ribosome biogenesis [BR:ece03009]
 Prokaryotic type
  ribosomal protein modification factors
   Z1833 (ycfD)
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA Cupin_1 Cupin_2 AraC_binding Tup_N
Other DBs
NCBI-ProteinID: AAG55932
UniProt: A0A0H3JD40
LinkDB
Position
complement(1677357..1678487)
AA seq 376 aa
MLNMEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQ
DGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSV
PGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGD
ILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRA
HPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDAL
KQGDVLVRLGGLRVLRIGDDVYTNGEKIDSPHRPALDALASNIALTAENFGDALEDPSFL
AMLAALVNSGYWFFEG
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgcttaacatggaataccaactcactcttaactggcccgattttcttgaacgtcactgg
cagaaacgcccggtggtgttaaaacgcggctttaataattttattgacccgatctctcca
gacgagttggcgggtctggcgatggaaagcgaagtcgacagtcgactggtcagtcaccag
gatggaaaatggcaggtcagccacggtccgttcgaaagctacgatcatctcggtgaaact
aactggtcattgttagtgcaagcagtgaaccactggcatgagccgaccgccgcgctgatg
cgaccgttccgtgaactaccggactggcgtattgatgatctgatgatctctttttctgta
cctggcggcggcgtcggcccgcatctcgatcagtacgacgtgtttatcattcagggtacc
ggacgtcgtcgctggcgagtgggcgagaagctgcaaatgaaacagcactgcccacatccg
gatctgttacaggtcgatccgttcgaagccatcatcgatgaagagctggagcctggcgat
attctttatattccgccaggattcccgcatgaaggctacgcgctggaaaatgcgatgaac
tattccgtgggttttcgcgcgccaaatacgcgggaattaattagcggatttgccgattat
gtgctgcaacgcgaactgggcggcaactactacagcgatcctgatgttccacctcgcgct
catcctgcggacgttctgccgcaagagatggataaactgcgtgagatgatgctcgaattg
atcaaccagccggaacactttaagcaatggtttggcgagtttatatcccagtcacgtcat
gaactggatatcgcgccgccggagccgccttatcagccagatgaaatctacgatgcgctg
aaacaaggtgatgtgctggtgcgcctgggtggtctgcgcgtattgcgcattggcgacgac
gtgtataccaatggtgagaagatcgattccccgcaccgtccggcactggatgcactcgcc
agcaacattgcgctgactgcggagaattttggcgatgcgctggaagatccgtcattcctc
gcgatgctcgcggcgctggtcaatagcgggtattggttcttcgaagggtaa

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