Escherichia coli O157 H7 EDL933 (EHEC): Z4123
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Entry
Z4123 CDS
T00044
Symbol
ygdE
Name
(GenBank) orf, hypothetical protein
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
ece
Escherichia coli O157:H7 EDL933 (EHEC)
Brite
KEGG Orthology (KO) [BR:
ece00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ece03009
]
Z4123 (ygdE)
Enzymes [BR:
ece01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
Z4123 (ygdE)
Ribosome biogenesis [BR:
ece03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Z4123 (ygdE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RLMM_N
RlmM_FDX
FtsJ
MIT_C
Motif
Other DBs
NCBI-ProteinID:
AAG57920
UniProt:
P0ADR7
LinkDB
All DBs
Position
complement(3729841..3730941)
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AA seq
366 aa
AA seq
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MNKVVLLCRPGFEKECAAEITDKXGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP
FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFC
RKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKF
PADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVD
NGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRE
TIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRIWAAVG
GRRDER
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggttgtattgctgtgccgtccgggctttgaaaaagagtgcgccgcagaaatt
accgataaanccggccagcgggagattttcggttttgcccgcgtgaaagagaatgcgggt
tatgtcatttatgaatgttatcaacctgatgatggcgataagttaatccgtgagctgccg
ttcagttcattaatttttgcccgccagtggtttgtggtgggggaactcttgcagcatttg
ccgccagaagatcgtattacccccattgtcggcatgttgcagggcgtagtagagaagggc
ggtgaactgcgtgttgaagttgccgataccaacgaaagcaaagagttgctgaaattctgc
cgtaaattcaccgtgccgctacgcgctgccttgcgcgatgccggggtgctggcgaactat
gaaacgccgaagcgtccggttgtgcatgtattctttattgcaccaggctgctgctatacc
ggttactcatacagcaacaataattcgccgttctatatgggcattccgcgcctgaaattt
ccggcagatgcgccgagtcgttccacgctcaaactggaagaggcatttcatgtgtttatt
cctgcggatgagtgggatgaacgcctggcgaacgggatgtgggcggtggatttaggcgct
tgccctggcggctggacctaccaactggtgaagcgcaacatgtgggtttattccgtcgac
aacggcccgatggcgcaaagtctgatggataccggacaggtgacgtggctgcgggaagac
ggtttcaaattccgtccgacgcgcagcaatatctcctggatggtatgcgatatggttgaa
aaaccggcgaaagttgcggcattgatggcgcagtggctggttaatggctggtgtcgtgaa
accattttcaacctcaaactgccgatgaaaaaacgctacgaagaagtgtcacacaatctg
gcgtatattcaggcacagcttgatgaacatggcataaatgctcagattcaggcgcggcag
ttgtatcacgatcgcgaagaagtgacggtgcacgtccgccgtatctgggctgcggtgggt
ggtcgtcgcgacgagcgataa
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integrated database retrieval system
