Escherichia coli K-12 W3110: JW0997
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Entry
JW0997 CDS
T00068
Symbol
ycdM
Name
(GenBank) predicted monooxygenase
KO
K09018
pyrimidine oxygenase [EC:
1.14.99.46
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj00240
Pyrimidine metabolism
ecj01100
Metabolic pathways
Module
ecj_M00939
Pyrimidine degradation, uracil => 3-hydroxypropanoate
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JW0997 (ycdM)
Enzymes [BR:
ecj01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.46 pyrimidine oxygenase
JW0997 (ycdM)
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Gene cluster
GFIT
Motif
Pfam:
Bac_luciferase
Motif
Other DBs
NCBI-ProteinID:
BAA35789
UniProt:
P75898
Structure
PDB
PDBj
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All DBs
Position
complement(1073285..1074433)
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AA seq
382 aa
AA seq
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MQDAAPRLTFTLRDEERLMMKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYH
FDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMA
ATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSD
FKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSARYADFNFCFGKGVNTPTAFAPTA
ARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRS
GTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETF
GERIQPLMQCRAHLPALTQEVA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgcagcgccccgtctgactttcactttacgagacgaagagaggttgatgatg
aaaattggcgtattcgtacctattggcaacaacggctggctcatttcgacccacgcgccg
cagtacatgccgacctttgaactgaataaagccattgtgcaaaaagcggagcactaccat
ttcgatttcgccctgtcgatgatcaaactgcgtggctttggcggcaaaactgagttctgg
gatcacaaccttgagtcgttcaccttgatggcggggctggcggccgtgacctcgcgcatt
cagatttacgccactgctgccaccttaacgttacctccggcaatcgtcgcccgtatggcc
gcaaccatcgactccatctctggcgggcgttttggcgtcaacctcgtgactggctggcaa
aagcccgagtatgagcagatgggtatctggcctggcgatgactatttctcccgtcgttac
gactatctcaccgaatatgttcaggtgctgcgcgacctgtggggcacggggaaaagcgat
tttaaaggcgattttttcaccatgaatgattgtcgcgtgagtccgcaaccgagtgtcccc
atgaaagtgatctgcgccgggcaaagcgacgctggcatggcgttctccgcccggtatgcc
gatttcaacttctgtttcggcaaaggcgtaaatacacccacggctttcgccccgaccgct
gcgcggatgaaacaggccgcagagcaaaccggacgcgacgttggctcttatgtgttgttt
atggtgattgccgatgaaaccgacgatgccgctcgcgccaaatgggaacactacaaagcg
ggcgcggatgaagaggcgttaagctggctaaccgaacaaagtcagaaagatacccgctcc
ggtactgacaccaacgttcgtcagatggccgatcccacttcggcggtaaacatcaatatg
gggacgttagtcggttcttacgccagtgtcgcgcgcatgttagatgaagtcgcaagcgtg
cctggtgccgaaggcgtgctgttaaccttcgacgattttctgtcgggaatcgaaaccttc
ggcgagcgcattcaaccactgatgcaatgccgcgcccatctacctgcgctgactcaggag
gtggcatga
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