Escherichia coli K-12 W3110: JW5388
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Entry
JW5388 CDS
T00068
Symbol
ypdA
Name
(GenBank) predicted sensory kinase in two-component system with YpdB
KO
K27884
two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:
2.7.13.3
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JW5388 (ypdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecj01001
]
JW5388 (ypdA)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ecj02022
]
JW5388 (ypdA)
Enzymes [BR:
ecj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JW5388 (ypdA)
Protein kinases [BR:
ecj01001
]
Histidine kinases
LytTR family [OT]
JW5388 (ypdA)
Two-component system [BR:
ecj02022
]
LytTR family
PyrS-PyrR (pyruvate reutilization)
JW5388 (ypdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5TM-5TMR_LYT
His_kinase
HATPase_c
GAF
ECF-ribofla_trS
GAF_2
ECF_trnsprt
HATPase_c_2
SpoVT_C
GAF_3
Motif
Other DBs
NCBI-ProteinID:
BAA16250
UniProt:
P0AA93
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Position
2504117..2505814
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AA seq
565 aa
AA seq
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MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKELLAVTAIFSLFALFST
WSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRYLIDIGGVTAIPCFITSIL
AGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWAPTTALGIDIVSKIGIPMILG
SVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLPLFRHVNSESLRKVCEIIRDDIH
ADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSM
LVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAE
LRALQSKINPHFLFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKEL
YQIKDYIAIEQARFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTI
SVAECGNRVRIAVRDTGHGIDPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRL
EPGTEIAFYIPNQRTPVASQATLLL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgaaatattcaacatgctgctggcggtcttcgatcgggcagcgttaatgcttatc
tgcctgttctttctcatccgtatccgcctgtttcgcgaactgttgcacaagtcggcgcac
tccccaaaagaattgctcgccgttaccgccattttctcgctgttcgccctgttcagcacc
tggtccggcgttcccgtagaaggctcgctggtgaacgtacgtattatcgcggtgatgtcc
ggcgggattctgtttggcccgtgggtaggcatcattaccggcgtgattgcgggtattcac
cggtatttaattgatatcggcggcgtgacggcgatcccctgctttatcaccagcattctg
gcgggttgtatatcgggctggatcaacctgaaaatccccaaagcacagcgctggcgcgtc
ggtattctcggcggcatgttgtgtgagacgttgaccatgattctggtaattgtctgggca
ccaactaccgcgttggggatcgatatcgtctctaaaatcggcattccaatgatcctcggt
agcgtctgtatcggctttattgtgcttctggtgcaaagcgttgagggcgaaaaagaggcc
agcgccgcgcggcaggccaagctggcgctggatatcgccaacaaaacgctaccgctgttt
cgccatgtcaatagcgagtcattacgcaaggtctgcgaaattatccgcgatgacattcac
gccgatgcggtggcgattactaataccgatcatgtgctggcctatgttggcgtgggtgaa
cataactatcagaatggcgatgacttcattagcccgactacccgtcaggcgatgaattac
ggaaaaatcatcattaaaaacaatgatgaagcccaccgcacaccagagattcattccatg
ctggtgatcccattgtgggagaaaggggtcgtgaccggaacgctgaaaatttactactgc
cacgcgcatcagatcacctcgtcattacaggaaatggcggtcggtctgtcgcaaatcatc
tccacgcaactggaggtttcacgcgccgagcagctacgtgaaatggcaaataaggcagag
cttcgcgccctgcaaagcaaaattaatccccattttctgtttaacgctctgaacgctatt
tcatcgtcaatccgtctgaatccggataccgctcgccagttgatctttaatctgtcgcgt
tatctgcgctataacattgaattaaaagacgatgagcaaatcgatatcaaaaaagagctg
tatcaaattaaagactatattgccattgagcaggcccgctttggtgacaagctgacggtt
atctatgatattgatgaagaggtgaattgctgcattcccagcctgctgatccagccgttg
gtggagaacgccattgtccacggtattcagccttgcaaaggtaaaggcgttgtcaccatc
agcgttgcagagtgcggaaatcgggtacgcattgcggtgcgagataccgggcacggcatc
gatccaaaggtgattgagcgggtcgaagcgaatgaaatgccgggcaataaaattggcctg
ctgaatgtccatcatcgcgtgaagttattgtatggcgaggggctgcatatccgccgcctg
gagccggggacggaaattgcgttttacattcctaaccaacgcaccccagtcgcctcacag
gctacgttattgctttga
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