Epargyreus clarus: 140747025
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Entry
140747025 CDS
T11494
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
eclr Epargyreus clarus
Pathway
eclr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eclr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140747025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eclr03041
]
140747025
Spliceosome [BR:
eclr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140747025
Complex C
U5 SnRNP specific factors
140747025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
TniB
Motif
Other DBs
NCBI-GeneID:
140747025
NCBI-ProteinID:
XP_072935353
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MDGDLYDEFGNYIGPDLESDSEDEQSVYGQDNRDADEDAMEEDEDADAEPEAAPMSVVLH
EDKRYYPQAVEVYGPDVETVVQEEDTQALDKPLVEPVKTKKFQVQEQQLPETVYDMEYLA
DMLDNTNLMRNITLMGHLHNGKTSFVDCLIRQTHPGTINHDTTIPMRYTDTLFVEQERGV
SIKSMPVTLLLKNIKGKSHLFNIMDTPGHVNFSDEVTAALRISDGAVLFVDAAEGIMLNT
ERLLRHAVQERVPLTVCINKIDRLILELKLPPADAYYKLRHIIDELNSMVETNQPQDNPE
EPATVFSPLLGNVCFASSLYDVCFTLESFAAMYASGRSHELRPSDMAGWLWGDVYFNAKT
RRFTRKPPHQSAQRSFVEFILEPLYKIFAQVVGDVDDTLPAMLSELGIKLTKQEAKLNVR
PLLRLVCSRFFGDFCGFVDMIARHIPSPAAAAPHKVAHAYRGTAGALRNDMLACDQGGRL
VAHTTKMYPTDDCTFFLVLARIMSGTLYAGQAVRVLGENYSTQDEEDSRVMNVGRLWIYE
ARYKIELNRVPAGCWALIEGIDQPIVKTCTVVSADEDEELFTFKPLRFNTQAVVKIAVEP
VNPSELPKMLDGLRKVNKSYPVLSTRVEESGEHVILGAGELHLDCVMHDLRDMYSEIDIK
VADPVVSFCETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAGAVCVTWDRRRL
GEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKHLLASVKDSIVQGFQWGT
REGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFV
EVQAPADCVSAVYTVLAKRRGHVTQDAPVAGSPLYTIKAFVPAIDSFGFETDLRTHTQGQ
AFCLQVFHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFD
DPMLLELARQDVQLN
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggacggggacctttacgatgagtttggtaactatatcgggccggatctggagtctgac
tccgaggacgagcagagcgtatacgggcaggacaaccgggacgccgacgaggatgcaatg
gaggaggacgaggatgctgacgcggagcccgaggctgcgcccatgtctgtagtgctacat
gaagacaaaagatactatccacaagcagtcgaagtttatgggcccgatgttgaaactgtg
gttcaagaggaagacacacaggccctggacaagcctctcgtggagccagtgaagaccaag
aagtttcaggttcaagagcagcagctgccggagacggtgtacgatatggagtacctggcc
gacatgttggacaataccaatctgatgaggaatataacactcatgggtcatttgcataat
ggtaaaacatcatttgtggactgccttatcagacagacgcaccctgggacaataaaccac
gacacaaccatccccatgaggtacacggacacactgtttgtggagcaggagcgcggggtg
tccatcaagtccatgcccgtcacactgctcctcaagaacatcaaggggaagtcacacctg
ttcaatatcatggacactcccggtcatgttaactttagtgatgaagtcaccgctgctttg
aggatatctgatggtgctgtgttatttgtcgacgccgcagagggaataatgttgaacacg
gaacgtcttctccgacatgcggtacaggagcgagtgccgctcactgtgtgcataaacaaa
attgaccgacttatcttagaactgaagttaccgcccgcggacgcatattacaagctccgg
catataatagatgagctgaactctatggtggaaacaaaccagcctcaggataatcctgaa
gaacctgctacagtgttttcgccattattaggcaacgtatgcttcgcgtcgtcgctatac
gacgtgtgcttcacactggagtcgttcgcggcgatgtacgcgagcgggcgctcgcacgag
ctgcggccgtcagacatggcggggtggctgtggggcgacgtctacttcaacgccaagacg
aggcggttcacgaggaaaccgccgcaccagtcggcgcagcgaagcttcgtggagtttatt
ctggagccgctgtataagatattcgcgcaagtggtaggcgacgtggacgatacgctgccg
gcgatgctgtcggagctgggcatcaagctcaccaagcaggaggcgaagctcaacgtgcgg
ccgctactccggctcgtgtgtagccgcttctttggagacttctgtgggttcgtggacatg
atagcgcgccacatcccctcgccagcagcggcggcaccacataaagtggcgcacgcgtac
cgcggcactgcaggtgctctgcgcaacgacatgctcgcctgcgaccagggcggcaggctg
gtggcgcacaccaccaagatgtaccccaccgatgactgcacgttcttccttgtgctggcg
cgcataatgtcgggcacgctgtacgcggggcaggcggtgcgcgtgctgggcgagaactac
agcacgcaggacgaggaggactcgcgcgtcatgaacgtcggccgcctctggatatacgag
gccagatacaagatagaactaaaccgtgtgccggcgggttgctgggcgcttatcgaagga
atcgatcagccgatagtaaagacctgtacagtggtgtcagctgatgaagacgaggaactg
ttcacgttcaagccgttgcgctttaacacacaggcggtggtgaagatcgcagtggaaccg
gttaacccatctgagctgcctaagatgttggatgggctgaggaaggtgaacaagtcgtac
ccggtgctgtcgacgcgcgtggaggagagcggcgagcacgtgatcctcggcgccggcgag
ctgcacctcgactgcgtcatgcacgacctgcgcgacatgtactcggagatcgacattaag
gtggcggacccggtggtgtcgttctgcgagacggtggttgaaacgtcctcgctgaagtgc
ttcgcggagacgccgaacaagcgcaacaagctgacgatgatcgcggagccgctggagcgc
gggctcgccgaggacatcgaggcgggcgccgtctgcgtcacctgggaccggcggcgcctc
ggcgagttctttcagaccaaatacgattgggacttgctagccgctcgatctatttgggcg
tttggtcccgatgccacggggcccaatatcctcgtggacgacacgctgccgtcggaagtc
gacaagcacttacttgcgtccgtgaaagacagtattgtacaaggttttcagtggggcaca
cgagagggtccgctgtgtgaggagccaatcagaaacgtaaaattcaagattttggacgca
gtaatagcccaggagccgctacacaggggcggcggacagatcattcctactgcgagaagg
gtggcgtactctgcgttcctgatggcgacgccgcggctgatggagccgtacctgttcgtg
gaggtgcaggcgccggccgactgcgtgtccgccgtctacaccgtgctcgccaaacgcaga
ggacacgtgacgcaggacgcgcccgtggcgggctcgccgctgtacacgatcaaggcgttc
gtgccggcgatcgactcgttcggcttcgagacggacctccgcacgcacacgcagggccag
gccttctgcctgcaggtgttccaccactggcagatcgtgcccggcgacccgctcgacaag
agcatcgttatacggcctctggaaccgcaaccggcgacgcacctggcgcgagagttcatg
atcaagacgcggcggcgcaaggggctgagtgaggacgtgtctatcaataagttcttcgac
gatcctatgttgttggagctggcgaggcaagatgtgcaactcaattga
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