Escherichia coli SMS-3-5 (environmental): EcSMS35_1566
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Entry
EcSMS35_1566 CDS
T00672
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ecm
Escherichia coli SMS-3-5 (environmental)
Pathway
ecm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EcSMS35_1566 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecm03400
]
EcSMS35_1566 (nth)
Enzymes [BR:
ecm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EcSMS35_1566 (nth)
DNA repair and recombination proteins [BR:
ecm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EcSMS35_1566 (nth)
Prokaryotic type
EcSMS35_1566 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
P_gingi_FimA
Motif
Other DBs
NCBI-ProteinID:
ACB17277
UniProt:
B1LEQ3
LinkDB
All DBs
Position
complement(1550696..1551331)
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AA seq
211 aa
AA seq
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MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcaaaacgcctggagatcctcactcgcctgcgtgagaacaatcctcatccc
accaccgagcttaatttcagttcgccttttgaattgctgattgccgtactgctttccgct
caggcgaccgatgtcagtgttaataaggcgacggcgaaactctacccggtggctaataca
cctgcagcgatgcttgaactgggcgtcgaaggggtgaaaacctatatcaaaaccattggg
ctttataacagcaaagcagaaaatatcatcaaaacctgccgtatcttactggaacagcat
aatggcgaggttccggaagatcgtgctgcgcttgaagccctgcctggtgtaggtcgtaaa
acagccaacgtcgtattaaacactgcattcggctggccgactattgctgtcgacacgcac
attttccgcgtttgtaatcgtactcaatttgcgccggggaaaaacgtcgaacaggtagaa
gaaaagctactgaaagtggttccggcagagtttaaagtcgactgccaccattggttgatc
ctccacgggcgatatacctgcattgcccgcaagccccgctgtggctcttgtattattgaa
gatctttgtgaatacaaagagaaagttgacatctga
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