KEGG   Escherichia coli K-12 MG1655: b0145
Entry
b0145             CDS       T00007                                 
Symbol
dksA
Name
(RefSeq) RNA polymerase-binding transcription factor DksA
  KO
K06204  RNA polymerase-binding transcription factor
Organism
eco  Escherichia coli K-12 MG1655
Pathway
eco02026  Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:eco00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02026 Biofilm formation - Escherichia coli
    b0145 (dksA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eco03000]
    b0145 (dksA)
   03021 Transcription machinery [BR:eco03021]
    b0145 (dksA)
   03009 Ribosome biogenesis [BR:eco03009]
    b0145 (dksA)
Transcription factors [BR:eco03000]
 Prokaryotic type
  Other transcription factors
   Others
    b0145 (dksA)
Transcription machinery [BR:eco03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription elongation factors
     b0145 (dksA)
Ribosome biogenesis [BR:eco03009]
 Prokaryotic type
  rRNA transcription factors
   b0145 (dksA)
SSDB
Motif
Pfam: DksA_N zf-dskA_traR DUF7342
Other DBs
NCBI-GeneID: 944850
NCBI-ProteinID: NP_414687
Pasteur: dksA
RegulonDB: RDBECOLIGNC00224
ECOCYC: EG10230
ASAP: ABE-0000499
UniProt: P0ABS1
Structure
LinkDB
Position
complement(160149..160604)
AA seq 151 aa
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT
HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE
IGIRRLEARPTADLCIDCKTLAEIREKQMAG
NT seq 456 nt   +upstreamnt  +downstreamnt
atgcaagaagggcaaaaccgtaaaacatcgtccctgagtattctcgccatcgctggggtg
gaaccatatcaggagaagccgggcgaagagtatatgaatgaagcccagctggcgcacttc
cgtcgtattctggaagcatggcgtaatcaactcagggatgaagtcgatcgcaccgttaca
catatgcaggatgaagcagccaacttcccggacccggtagaccgtgcagcccaggaagaa
gagttcagcctcgaactgcgtaaccgcgatcgcgagcgtaagctgatcaaaaagatcgag
aagacgctgaaaaaagtggaagacgaagatttcggctactgcgaatcctgcggtgttgaa
attggtattcgccgtctggaagcgcgcccgacagccgatctgtgcatcgactgcaaaacg
ctggctgaaattcgcgaaaaacagatggctggctaa

DBGET integrated database retrieval system