KEGG   PATHWAY: ecoh03010
Entry
ecoh03010                   Pathway                                
Name
Ribosome - Escherichia coli O145:H28 RM13516 (EHEC)
Class
Genetic Information Processing; Translation
Pathway map
ecoh03010  Ribosome
ecoh03010

Other DBs
PDB: 1FFK 1J5E 4V4A 4YBB 4V6U 4V6X 4UG0 4V88 3A1Y
Organism
Escherichia coli O145:H28 RM13516 (EHEC) [GN:ecoh]
Gene
ECRM13516_0021  rpsT; SSU ribosomal protein S20p [KO:K02968]
ECRM13516_0178  rpsB; SSU ribosomal protein S2p (SAe) [KO:K02967]
ECRM13516_0212  rrsH; 16S ribosomal RNA [KO:K01977]
ECRM13516_0215  rrlH; 23S ribosomal RNA [KO:K01980]
ECRM13516_0216  rrfH; 5S ribosomal RNA [KO:K01985]
ECRM13516_0274  [KO:K02919]
ECRM13516_0275  [KO:K02909]
ECRM13516_0951  rpsA; SSU ribosomal protein S1p [KO:K02945]
ECRM13516_1189  [KO:K02909]
ECRM13516_1338  rpmF; LSU ribosomal protein L32p [KO:K02911]
ECRM13516_2118  rplT; LSU ribosomal protein L20p [KO:K02887]
ECRM13516_2119  rpmI; LSU ribosomal protein L35p [KO:K02916]
ECRM13516_2890  rplY; LSU ribosomal protein L25p [KO:K02897]
ECRM13516_3271  rrfG; 5S ribosomal RNA [KO:K01985]
ECRM13516_3272  rrlG; 23S ribosomal RNA [KO:K01980]
ECRM13516_3274  rrsG; 16S ribosomal RNA [KO:K01977]
ECRM13516_3288  rplS; LSU ribosomal protein L19p [KO:K02884]
ECRM13516_3291  rpsP; SSU ribosomal protein S16p [KO:K02959]
ECRM13516_3827  rpsU; SSU ribosomal protein S21p [KO:K02970]
ECRM13516_3928  rpsO; SSU ribosomal protein S15p (S13e) [KO:K02956]
ECRM13516_3948  rpmA; LSU ribosomal protein L27p [KO:K02899]
ECRM13516_3949  rplU; LSU ribosomal protein L21p [KO:K02888]
ECRM13516_3987  rpsI; SSU ribosomal protein S9p (S16e) [KO:K02996]
ECRM13516_3988  rplM; LSU ribosomal protein L13p (L13Ae) [KO:K02871]
ECRM13516_4029  rrfF; 5S ribosomal RNA [KO:K01985]
ECRM13516_4031  rrfD; 5S ribosomal RNA [KO:K01985]
ECRM13516_4032  rrlD; 23S ribosomal RNA [KO:K01980]
ECRM13516_4035  [KO:K01977]
ECRM13516_4051  rplQ; LSU ribosomal protein L17p [KO:K02879]
ECRM13516_4053  rpsD; SSU ribosomal protein S4p (S9e) [KO:K02986]
ECRM13516_4054  rpsK; SSU ribosomal protein S11p (S14e) [KO:K02948]
ECRM13516_4055  rpsM; SSU ribosomal protein S13p (S18e) [KO:K02952]
ECRM13516_4056  rpmJ; LSU ribosomal protein L36p [KO:K02919]
ECRM13516_4058  rplO; LSU ribosomal protein L15p (L27Ae) [KO:K02876]
ECRM13516_4059  rpmD; LSU ribosomal protein L30p (L7e) [KO:K02907]
ECRM13516_4060  rpsE; SSU ribosomal protein S5p (S2e) [KO:K02988]
ECRM13516_4061  rplR; LSU ribosomal protein L18p (L5e) [KO:K02881]
ECRM13516_4062  rplF; LSU ribosomal protein L6p (L9e) [KO:K02933]
ECRM13516_4063  rpsH; SSU ribosomal protein S8p (S15Ae) [KO:K02994]
ECRM13516_4064  rpsN; SSU ribosomal protein S14p (S29e) / SSU ribosomal protein S14p (S29e), zinc-independent [KO:K02954]
ECRM13516_4065  rplE; LSU ribosomal protein L5p (L11e) [KO:K02931]
ECRM13516_4066  rplX; LSU ribosomal protein L24p (L26e) [KO:K02895]
ECRM13516_4067  rplN; LSU ribosomal protein L14p (L23e) [KO:K02874]
ECRM13516_4068  rpsQ; SSU ribosomal protein S17p (S11e) [KO:K02961]
ECRM13516_4069  rpmC; LSU ribosomal protein L29p (L35e) [KO:K02904]
ECRM13516_4070  rplP; LSU ribosomal protein L16p (L10e) [KO:K02878]
ECRM13516_4071  rpsC; SSU ribosomal protein S3p (S3e) [KO:K02982]
ECRM13516_4072  rplV; LSU ribosomal protein L22p (L17e) [KO:K02890]
ECRM13516_4073  rpsS; SSU ribosomal protein S19p (S15e) [KO:K02965]
ECRM13516_4074  rplB; LSU ribosomal protein L2p (L8e) [KO:K02886]
ECRM13516_4075  rplW; LSU ribosomal protein L23p (L23Ae) [KO:K02892]
ECRM13516_4076  rplD; LSU ribosomal protein L4p (L1e) [KO:K02926]
ECRM13516_4077  rplC; LSU ribosomal protein L3p (L3e) [KO:K02906]
ECRM13516_4078  rpsJ; SSU ribosomal protein S10p (S20e) [KO:K02946]
ECRM13516_4084  rpsG; SSU ribosomal protein S7p (S5e) [KO:K02992]
ECRM13516_4085  rpsL; SSU ribosomal protein S12p (S23e) [KO:K02950]
ECRM13516_4423  rpmG; LSU ribosomal protein L33p [KO:K02913]
ECRM13516_4424  rpmB; LSU ribosomal protein L28p [KO:K02902]
ECRM13516_4553  rpmH; LSU ribosomal protein L34p [KO:K02914]
ECRM13516_4603  rrsC; 16S ribosomal RNA [KO:K01977]
ECRM13516_4605  rrlC; 23S ribosomal RNA [KO:K01980]
ECRM13516_4606  rrfC; 5S ribosomal RNA [KO:K01985]
ECRM13516_4702  rrsA; 16S ribosomal RNA [KO:K01977]
ECRM13516_4704  rrlA; 23S ribosomal RNA [KO:K01980]
ECRM13516_4705  rrfA; 5S ribosomal RNA [KO:K01985]
ECRM13516_4789  rpmE; LSU ribosomal protein L31p [KO:K02909]
ECRM13516_4824  rrsB; 16S ribosomal RNA [KO:K01977]
ECRM13516_4826  rrlB; 23S ribosomal RNA [KO:K01980]
ECRM13516_4827  rrfB; 5S ribosomal RNA [KO:K01985]
ECRM13516_4839  rplK; LSU ribosomal protein L11p (L12e) [KO:K02867]
ECRM13516_4840  rplA; LSU ribosomal protein L1p (L10Ae) [KO:K02863]
ECRM13516_4841  rplJ; LSU ribosomal protein L10p (P0) [KO:K02864]
ECRM13516_4842  rplL; LSU ribosomal protein L7/L12 (P1/P2) [KO:K02935]
ECRM13516_4866  rrsE; 16S ribosomal RNA [KO:K01977]
ECRM13516_4869  rrlE; 23S ribosomal RNA [KO:K01980]
ECRM13516_4870  rrfE; 5S ribosomal RNA [KO:K01985]
ECRM13516_5144  rplI; LSU ribosomal protein L9p [KO:K02939]
ECRM13516_5145  rpsR; SSU ribosomal protein S18p [KO:K02963]
ECRM13516_5147  rpsF; SSU ribosomal protein S6p [KO:K02990]
Reference
  Authors
Ban N, Nissen P, Hansen J, Capel M, Moore PB, Steitz TA.
  Title
Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
  Journal
Nature 400:841-847 (1999)
DOI:10.1038/23641
Reference
  Authors
Clemons WM Jr, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V.
  Title
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
  Journal
Nature 400:833-840 (1999)
DOI:10.1038/23631
Reference
  Authors
Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF.
  Title
X-ray crystal structures of 70S ribosome functional complexes.
  Journal
Science 285:2095-2104 (1999)
DOI:10.1126/science.285.5436.2095
Reference
  Authors
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA.
  Title
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
  Journal
Science 289:905-920 (2000)
DOI:10.1126/science.289.5481.905
Reference
  Authors
Nissen P, Hansen J, Ban N, Moore PB, Steitz TA.
  Title
The structural basis of ribosome activity in peptide bond synthesis.
  Journal
Science 289:920-930 (2000)
DOI:10.1126/science.289.5481.920
Reference
  Authors
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V.
  Title
Structure of the 30S ribosomal subunit.
  Journal
Nature 407:327-339 (2000)
DOI:10.1038/35030006
Reference
  Authors
Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V.
  Title
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
  Journal
Nature 407:340-348 (2000)
DOI:10.1038/35030019
Reference
  Authors
Noeske J, Wasserman MR, Terry DS, Altman RB, Blanchard SC, Cate JH
  Title
High-resolution structure of the Escherichia coli ribosome.
  Journal
Nat Struct Mol Biol 22:336-41 (2015)
DOI:10.1038/nsmb.2994
Reference
  Authors
Armache JP, Anger AM, Marquez V, Franckenberg S, Frohlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN
  Title
Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
  Journal
Nucleic Acids Res 41:1284-93 (2013)
DOI:10.1093/nar/gks1259
Reference
  Authors
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R
  Title
Structures of the human and Drosophila 80S ribosome.
  Journal
Nature 497:80-5 (2013)
DOI:10.1038/nature12104
Reference
  Authors
Khatter H, Myasnikov AG, Natchiar SK, Klaholz BP
  Title
Structure of the human 80S ribosome.
  Journal
Nature 520:640-5 (2015)
DOI:10.1038/nature14427
Reference
  Authors
Naganuma T, Nomura N, Yao M, Mochizuki M, Uchiumi T, Tanaka I
  Title
Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes.
  Journal
J Biol Chem 285:4747-56 (2010)
DOI:10.1074/jbc.M109.068098
KO pathway
ko03010   

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