Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_0153
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Entry
ECRM13516_0153 CDS
T03011
Symbol
dksA
Name
(GenBank) C4-type zinc finger protein, DksA/TraR family
KO
K06204
RNA polymerase-binding transcription factor
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
ECRM13516_0153 (dksA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecoh03000
]
ECRM13516_0153 (dksA)
03021 Transcription machinery [BR:
ecoh03021
]
ECRM13516_0153 (dksA)
03009 Ribosome biogenesis [BR:
ecoh03009
]
ECRM13516_0153 (dksA)
Transcription factors [BR:
ecoh03000
]
Prokaryotic type
Other transcription factors
Others
ECRM13516_0153 (dksA)
Transcription machinery [BR:
ecoh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
ECRM13516_0153 (dksA)
Ribosome biogenesis [BR:
ecoh03009
]
Prokaryotic type
rRNA transcription factors
ECRM13516_0153 (dksA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
DUF7342
Motif
Other DBs
NCBI-ProteinID:
AHG12849
LinkDB
All DBs
Position
complement(167295..167750)
Genome browser
AA seq
151 aa
AA seq
DB search
MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRILEAWRNQLRDEVDRTVT
HMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKTLKKVEDEDFGYCESCGVE
IGIRRLEARPTADLCIDCKTLAEIREKQMAG
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagggcaaaaccgtaaaacatcgtccctgagtattctcgccatcgctggggtg
gaaccatatcaggagaagccgggcgaagagtatatgaatgaagcccagctggcgcacttc
cgtcgtattctggaagcatggcgtaatcaactcagggatgaagtcgatcgcaccgttaca
catatgcaggatgaagcagccaacttcccggacccggtagaccgtgcagcccaggaagaa
gagttcagcctcgaactgcgtaaccgcgatcgcgagcgtaagctgatcaaaaagatcgag
aagacgctgaaaaaagtggaagacgaagatttcggctactgcgaatcctgcggtgttgaa
attggtattcgccgtctggaagcgcgcccgacagccgatctgtgcatcgactgcaaaacg
ctggctgaaattcgcgaaaaacagatggctggctaa
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