Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_3993
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Entry
ECRM13516_3993 CDS
T03011
Symbol
mdh
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh00020
Citrate cycle (TCA cycle)
ecoh00270
Cysteine and methionine metabolism
ecoh00620
Pyruvate metabolism
ecoh00630
Glyoxylate and dicarboxylate metabolism
ecoh00680
Methane metabolism
ecoh00710
Carbon fixation by Calvin cycle
ecoh00720
Other carbon fixation pathways
ecoh01100
Metabolic pathways
ecoh01110
Biosynthesis of secondary metabolites
ecoh01120
Microbial metabolism in diverse environments
ecoh01200
Carbon metabolism
Module
ecoh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ecoh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ecoh_M00012
Glyoxylate cycle
ecoh_M00168
CAM (Crassulacean acid metabolism), dark
ecoh_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ECRM13516_3993 (mdh)
00620 Pyruvate metabolism
ECRM13516_3993 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
ECRM13516_3993 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
ECRM13516_3993 (mdh)
00720 Other carbon fixation pathways
ECRM13516_3993 (mdh)
00680 Methane metabolism
ECRM13516_3993 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
ECRM13516_3993 (mdh)
Enzymes [BR:
ecoh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
ECRM13516_3993 (mdh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
AHG16618
LinkDB
All DBs
Position
complement(3955877..3956815)
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AA seq
312 aa
AA seq
DB search
MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG
EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV
TILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLK
KDIALGEEFVNK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgcagtcctcggcgctgctggcggtattggccaggcgcttgcactactgtta
aaaacccaactgccttcaggttcagaactctctctgtatgatatcgctccagtgactccc
ggtgtggccgtcgatctgagccatatccctactgctgtgaaaatcaaaggtttttctggt
gaagatgcgactccggcgctggaaggcgcagatgtcgttcttatctctgcaggtgtagcg
cgtaaaccgggtatggatcgttccgacctgtttaacgttaacgccggcatcgtgaaaaac
ctggtacagcaagttgcgaaaacctgcccgaaagcgtgcattggtattatcactaacccg
gttaacaccactgttgcaattgctgctgaagtgctgaaaaaagccggtgtttatgacaaa
aacaaactgttcggcgttaccacgctggatatcattcgttccaacacctttgttgcggaa
ctgaaaggcaaacagccaggcgaagttgaagtgccggttattggcggtcactctggtgtt
accattctgccgctgttgtcacaggttcctggcgttagttttaccgagcaggaagtggct
gatctgaccaaacgtatccagaacgcgggtactgaggtggttgaagcgaaagccggtggc
gggtctgcaaccctgtctatgggccaggcagctgcacgttttggtctgtctctggttcgt
gcactgcagggcgaacaaggcgttgtcgaatgtgcctacgttgaaggcgacggtcagtac
gcccgtttcttctctcaaccgctgctgctgggtaaaaacggcgtggaagagcgtaaatct
atcggtaccctgagcgcatttgaacagaacgcgctggaaggtatgctggatacgctcaag
aaagatatcgccctgggcgaagagttcgttaataagtaa
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