Escherichia coli O145 H28 RM13516 (EHEC): ECRM13516_4478
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Entry
ECRM13516_4478 CDS
T03011
Symbol
tir
Name
(GenBank) translocated intimin receptor Tir
KO
K12784
translocated intimin receptor
Organism
ecoh
Escherichia coli O145:H28 RM13516 (EHEC)
Pathway
ecoh05130
Pathogenic Escherichia coli infection
Module
ecoh_M00542
EHEC/EPEC pathogenicity signature, T3SS and effectors
Brite
KEGG Orthology (KO) [BR:
ecoh00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05130 Pathogenic Escherichia coli infection
ECRM13516_4478 (tir)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tir_receptor_N
Tir_receptor_C
Tir_receptor_M
Motif
Other DBs
NCBI-ProteinID:
AHG17093
LinkDB
All DBs
Position
complement(4433983..4435665)
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AA seq
560 aa
AA seq
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MPIGNLGHNPNVNNSIPPAPPLPSQTDGAGGRGQLINSTGPLGSRALFTPVRNSMADSGD
NRASDVPGLPVNPMRLAASEITLNDGFEVLHDHGPLDTLNRQIGSSVFRVETQEDGKHIA
VGQRNGVETSVVLSDQEYARLQSIDPEGKDKFVFTGGRGGAGHAMVTVASDITEARQRIL
ELLEPKGTGESKGAGESKGVGELRESNSGAENTTETQTSTSTSTSTSSLRSDPKLWLALG
TVATGLIGLAATGIVQALALTPEPDSPTTTDPDAAASATETATRDQLTKEAFQNPDNQKV
NIDELGNAIPSGVLKDDVVANIEEQAKAAGEEAKQQAIENNAQAQKKYDEQQAKRQEELK
VSSGAGYGLSGALILGGGIGVAVTAALHRKNQPVEQTTTTTTTTTSARTVENKPANNTPA
QGNVDTPGSEDTMESRRSSMASTSSTFFDTSSIGTVQNPYADVKTSLHDSQVPTSNSNTS
VQNMGNTDSVVYSTIQHPPRDTTDNGARLLGNPSAGIQSTYARLALSGGLRHDMGGLTGG
SNSAVNTSNNPPAPGSHRFV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcctattggtaatcttggtcataatcccaatgtgaataattcaattcctcctgcacct
ccattaccttcacaaaccgacggtgcaggggggcgtggtcagctcattaactctacgggg
ccgttgggatctcgtgcgctatttacgcctgtaaggaattctatggctgattctggcgac
aatcgtgccagtgatgttcctggacttcctgtaaatccgatgcgcctggcggcgtctgag
ataacactgaatgatggatttgaagttcttcatgatcatggtccgctcgatactcttaac
aggcagattggctcttcggtatttcgagttgaaactcaggaagatggtaaacatattgct
gtcggtcagaggaatggtgttgagacctctgttgttttaagtgatcaagagtacgctcgc
ttgcagtccattgatcctgaaggtaaagacaaatttgtatttactggaggccgtggtggt
gctgggcatgctatggtcaccgttgcttcagatatcacggaagcccgccaaaggatactg
gagctgttagagcccaaagggaccggggagtccaaaggtgctggggagtcaaaaggcgtt
ggggagttgagggagtcaaatagcggtgcggaaaacaccacagaaactcagacctcaacc
tcaacttcaacctcaacttccagccttcgttcagatcctaaactttggttggcgttgggg
actgttgctacaggtctgatagggttggcggcgacgggtattgtacaggcgcttgcattg
acgccggagccggatagcccaaccacgaccgaccctgatgcagctgcaagtgcaactgaa
actgcgacaagagatcagttaacgaaagaagcgttccagaacccagataatcaaaaagtt
aatatcgatgagctcggaaatgcgattccgtcaggggtattgaaagatgatgttgttgcg
aatatagaagagcaggctaaagcagcaggcgaagaggccaaacagcaagccattgaaaat
aatgctcaggcgcaaaaaaaatatgatgaacaacaagctaaacgccaggaggagctgaaa
gtttcatcgggggctggctacggtcttagtggcgcattgattcttggtgggggaattggt
gttgccgtcaccgctgcgcttcatcgaaaaaatcagccggtagaacaaacaacaacaact
actactacaactacaagcgcacgtacggtagagaataagcctgcaaataatacacctgca
cagggcaatgtagatacccctgggtcagaagataccatggagagcagacgtagctcgatg
gctagcacctcgtcgactttctttgacacttccagcatagggaccgtgcagaatccgtat
gctgatgttaaaacatcgctgcatgattcgcaggtgccgacttctaattctaatacgtct
gttcagaatatggggaatacagattctgttgtatatagcaccattcaacatcctccccgg
gatactactgataacggcgcacggttattaggaaatccaagtgcggggattcaaagcact
tatgcgcgtctggcgctaagtggtggattacgccatgacatgggaggattaacggggggg
agtaatagcgctgtgaatacttcgaataacccaccagcgccgggatcccatcgtttcgtc
taa
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