Escherichia coli O18 K1 PMV-1 (ExPEC): ECOPMV1_01057
Help
Entry
ECOPMV1_01057 CDS
T02847
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ecoi
Escherichia coli O18:K1 PMV-1 (ExPEC)
Pathway
ecoi00270
Cysteine and methionine metabolism
ecoi00450
Selenocompound metabolism
ecoi01100
Metabolic pathways
ecoi01110
Biosynthesis of secondary metabolites
ecoi01230
Biosynthesis of amino acids
Module
ecoi_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ecoi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
ECOPMV1_01057 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ECOPMV1_01057 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecoi01007
]
ECOPMV1_01057 (patB)
Enzymes [BR:
ecoi01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
ECOPMV1_01057 (patB)
Amino acid related enzymes [BR:
ecoi01007
]
Aminotransferase (transaminase)
Class II
ECOPMV1_01057 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
GWD1_pHisD
Motif
Other DBs
NCBI-ProteinID:
CDH64529
LinkDB
All DBs
Position
complement(1101307..1102470)
Genome browser
AA seq
387 aa
AA seq
DB search
MFDFDKIIERQSDKCRKWDHAFVCSRFGDVPESFIPLWIADMDFTSPPAVIDGFRRIVEH
GTFGYTWCFDEFYDAVIAFQRKRHQVEVEKSWITLTYGTVSTLHYTIQAYCKPGDSVMMN
TPVYDPFAMAAQRQGVQVLANPLRVEENRYQLDFNLIEEQLKTYRPTLWFFCSPHNPSGR
IWREEEIRQVSDLCQRYSTILVVDEVHAEHILDGKFVSCLTSGCAAQDNLIVLTSPNKAL
KLGGLKTSYSMIPDDSLRQRFRQQLEKNSITSPNLFGVWGIILAYQHGLPWLDALNGYLQ
GNARYLADALQTYFPAWKMMTPESSYLAWIDVSADESSATQLTQHFARQAGVVIEDGSHY
VQNGENYLQINFGSQRYWLERSTNRMQ
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatttcgacaaaatcattgagcgtcaaagtgataagtgccgtaaatgggaccat
gcctttgtttgctcgcgtttcggtgacgtcccggagtcctttatccccctgtggatagcc
gatatggatttcacctcaccgcctgcggtgattgacggtttccggcgcatcgtggagcac
ggcacctttggttatacctggtgctttgacgaattctacgacgcagtcatcgccttccag
cgcaaacgtcatcaggttgaggtggaaaaatcgtggatcacgttgacctacggcacggta
tccacgctgcactacacgattcaggcgtactgcaaaccgggtgacagcgtgatgatgaac
acgccggtctacgatccttttgcgatggcggcacagcgccagggcgtgcaggtactggct
aacccgctgcgcgtggaggaaaaccgctatcagcttgattttaatctgatagaagaacag
ctcaaaacctaccgtccaacgctgtggttcttctgctcgccgcataacccgtccggcagg
atctggcgcgaggaagaaatacgccaggtgtccgatctctgtcaacgctacagcacgatt
ctggtggtcgatgaggttcacgctgaacacattctggatggcaaattcgtcagttgtctc
acctctggctgtgccgcccaggacaacctgatcgtgctcacatcgcccaacaaagcgtta
aagctgggcgggctgaaaacctcctactccatgattccagacgactcgctgcgccagcgc
ttccgccagcagcttgagaagaactccattacctcgcccaatttgttcggggtatgggga
atcattctggcctatcaacacggtctgccctggctcgacgcgctgaacggttatctgcaa
ggcaacgcccggtatctggcggatgccctccagacctacttcccggcgtggaagatgatg
accccggaatcgtcgtatctggcgtggatagacgtaagcgcggatgagagtagcgcaacg
cagctaacccaacatttcgcacggcaggcaggcgtggtcatagaagacggcagccactat
gtacaaaacggtgaaaactacctacagattaattttggctctcagcgctactggctggag
cgatccaccaaccgaatgcagtaa
DBGET
integrated database retrieval system
