KEGG   Escherichia coli K-12 MDS42: ECMDS42_2264
Entry
ECMDS42_2264      CDS       T02541                                 
Symbol
ygcK
Name
(GenBank) predicted protein
  KO
K19046  CRISPR system Cascade subunit CasB
Organism
ecok  Escherichia coli K-12 MDS42
Brite
KEGG Orthology (KO) [BR:ecok00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecok02048]
    ECMDS42_2264 (ygcK)
Prokaryotic defense system [BR:ecok02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    ECMDS42_2264 (ygcK)
SSDB
Motif
Pfam: CRISPR_Cse2
Other DBs
NCBI-ProteinID: BAL39463
LinkDB
Position
complement(2392690..2393172)
AA seq 160 aa
MADEIDAMALYRAWQQLDNGSCAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLR
MVFCLSAGKNVIRHQDKKSEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRL
LTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
NT seq 483 nt   +upstreamnt  +downstreamnt
atggctgatgaaattgatgcaatggctttatatcgagcctggcaacaactggataatgga
tcatgtgcgcaaattagacgtgtttcagaacctgatgaattacgcgatatccctgcgttt
tataggctggtgcaaccttttggttgggaaaacccacgtcaccagcaggctcttttgcgc
atggtgttttgcctgagcgcaggaaagaatgtcatccgacatcaggacaaaaaatcggag
caaacaacaggtatctcgttgggaagagctttagccaatagtggaagaattaacgagcgc
cgtatctttcaattaattcgggctgacagaacagccgatatggtccagttacgtcgatta
cttactcacgccgaacccgtacttgactggccattaatggccaggatgttgacctggtgg
ggaaagcgcgaacgccagcaacttctggaagattttgtattgaccacaaacaaaaatgcg
taa

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