Eikenella corrodens: SAMEA4412678_2088
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Entry
SAMEA4412678_2088 CDS
T05039
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ecor
Eikenella corrodens
Pathway
ecor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4412678_2088 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecor03400
]
SAMEA4412678_2088 (nth)
Enzymes [BR:
ecor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAMEA4412678_2088 (nth)
DNA repair and recombination proteins [BR:
ecor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA4412678_2088 (nth)
Prokaryotic type
SAMEA4412678_2088 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
SNW10683
UniProt:
A0A8B4GG31
LinkDB
All DBs
Position
1:2108304..2108936
Genome browser
AA seq
210 aa
AA seq
DB search
MNPQKRREIFQRLHDANPNPTTELVFHSPFELLIAVLLSAQATDKGVNKATAKLFAVANT
PQAILDLGLDQLMEYTRTIGLYQTKSKHIMQTCRLLLEKHGGEVPNTREALEELPGVGRK
TANVVLNTAFGQPTMAVDTHIFRVANRMNLAPGKNVREVEDKLMRFVPKEFLLNAHHWLI
LHGRYTCKAQKPQCHECIVYDLCEYKGKTV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcaaaaacgccgcgaaatcttccagcgcctgcacgacgccaaccccaacccc
accaccgagctggtgtttcacagccccttcgagctgctcatcgccgtgctgctttctgcc
caagccaccgacaaaggcgtgaacaaagctactgccaaactctttgccgtggccaacact
ccgcaagccatcctcgatttgggtctagaccaactgatggaatatacccgtaccatcggc
ctctaccaaaccaaatctaaacacattatgcaaacctgccgcctgctcctggaaaagcac
ggcggcgaagtgccgaatacccgcgaagcgctcgaagagctgcccggcgtcggccgcaaa
accgccaatgttgtgctcaacactgccttcggccaaccgaccatggctgtagatacccac
attttccgcgtggccaaccgcatgaatcttgcccccggcaaaaatgtgcgcgaagtagaa
gacaaactcatgcgcttcgtgcccaaagaattcctgctcaacgcccaccattggctcatc
ctgcacggccgctacacctgcaaggcgcaaaaaccccaatgccacgaatgcatcgtgtat
gacttatgcgaatacaaaggcaaaacggtttaa
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