Escherichia coli O25b K100 H4-ST131 EC958 (UPEC): EC958_0971
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Entry
EC958_0971 CDS
T04373
Symbol
ybjF
Name
(GenBank) hypothetical RNA methyltransferase YbjF
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
ecos
Escherichia coli O25b:K100:H4-ST131 EC958 (UPEC)
Brite
KEGG Orthology (KO) [BR:
ecos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecos03009
]
EC958_0971 (ybjF)
Enzymes [BR:
ecos01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
EC958_0971 (ybjF)
Ribosome biogenesis [BR:
ecos03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EC958_0971 (ybjF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CDN81225
UniProt:
A0AA36KVX5
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All DBs
Position
907846..908973
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAHVFAALKPFIARAGLTPYNVARKRG
ELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIM
EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV
PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMF
PHTAHYEVLTLLVKQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactttacgacgcgggtcgctgtcgttcctgtcagtggataacgcagccg
attccagagcaactctccgctaaaactgccgatcttaaaaatctgctcgccgattttccg
gttgaggaatggtgtgcgccggtgtcaggcccggaacaagggtttcgtaataaagccaaa
atggtggtgagtggtagcgttgaaaaaccactgctcggtatgctgcatcgagatggtaca
ccggaagacctttgtgactgcccgctttatccagcctcatttgcgcacgtttttgcggcg
ctaaaaccgtttatcgcccgtgcggggttaacgccctacaacgtggcgcgtaaacgtggt
gaactgaaatacattctgctgactgaaagccagagcgatggtggcatgatgctgcgtttt
gtactgcgttctgataccaaactggcgcaattgcgtaaggcgctgccgtggttacaggaa
caattaccgcagctgaaagttattaccgtcaatattcagccggtacatatggcgattatg
gaaggggagacggagatctacctgaccgaacaacaggcactggcagagcgttttaatgac
gtaccgctgtggatccgtccgcaaagtttcttccagactaatccggcggtcgccagccag
ctgtacgccaccgcgcgcgactgggtacgacagctgccggttaaacatatgtgggatctg
ttctgcggtgtgggtggctttggtttacactgcgcgacgcctgacatgcagttaaccggg
atcgaaattgcaccagaggccattgcctgtgcgaagcagtcagccgctgaactgggctta
acgcgtttgcaatttcaggcgctggactctacgcagtttgccaccgctcagggggaagtg
ccggagctggtgctggttaacccgccgcgccgcggcatcggtaaaccgctgtgtgattat
ctctcaacgatggcaccgcgttttattatctactccagctgtaacgcccaaactatggcg
aaagatatccgcgaactgcctggttatcgcatcgaacgggtacagctttttgatatgttc
ccgcacaccgcgcactatgaagtgctgacgctactggtgaagcaataa
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