Escherichia coli O81 ED1a (commensal): ECED1_1834
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Entry
ECED1_1834 CDS
T00827
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ecq
Escherichia coli O81 ED1a (commensal)
Pathway
ecq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECED1_1834 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecq03400
]
ECED1_1834 (nth)
Enzymes [BR:
ecq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ECED1_1834 (nth)
DNA repair and recombination proteins [BR:
ecq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECED1_1834 (nth)
Prokaryotic type
ECED1_1834 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
P_gingi_FimA
Motif
Other DBs
NCBI-ProteinID:
CAR08027
UniProt:
B7MVB1
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All DBs
Position
1793406..1794041
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AA seq
211 aa
AA seq
DB search
MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcaaaacgcctggagatcctcactcgcctgcgtgagaacaatcctcatccc
accaccgagcttaatttcagttcgccttttgaattgctgattgccgtactgctttccgct
caggcgaccgatgtcagtgttaataaggcgacggcgaaactctacccggtggctaatacg
cctgcagcgatgcttgaactgggcgttgaaggggtgaaaacctatatcaaaacgattggc
ctttataacagcaaagcagaaaatatcatcaaaacctgccgtatattactggaacaacat
aatggcgaggttccggaagatcgtgctgcgcttgaagccctgcctggtgtaggtcgtaaa
acagccaacgtcgtattaaacactgcattcggctggccgactattgctgtcgacacacac
attttccgcgtttgtaatcgtacacaatttgcgccggggaaaaacgtcgaacaggtagaa
gaaaagctactgaaagtggttccggcagagtttaaagtcgactgccaccattggttgatc
ctgcacgggcgttatacctgcattgcccgcaagcctcgctgtggctcttgtattattgaa
gatctttgtgaatacaaagagaaagttgacatctaa
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