Etheostoma cragini (Arkansas darter): 117935632
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Entry
117935632 CDS
T07493
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117935632 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117935632 (c9orf72)
Membrane trafficking [BR:
ecra04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
117935632 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
117935632
NCBI-ProteinID:
XP_034713842
LinkDB
All DBs
Position
20:complement(18991736..19006246)
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AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKSEVAVEGECPMLAATFAYWDNILGPRVRHIWTPKGDQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELGFYLPLHAICVERLKHVIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKTHSVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCKTACSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSALWKTDSEDDIPPDTVIHTDETFTPDLNIFQDVLHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKTDLDL
TLEGDLNIVMAFAEKLRAGLHSFVFGKPFYTSMQERDALMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctggctgtccaccccagtcaccggctgtggctaagtctgaggtagcagtagag
ggagaatgcccgatgctggctgccacctttgcctactgggacaacatcctgggtccacgg
gtgcgccacatctggacaccaaagggagaccaactgatgttcctcagcgatggagaggtc
acatttctggccaatcatacactaaatggggagattctgcgtagtgctgagtgtggcgct
gtggatgtgaagttctttgtcctggcagaaaaaggcgtaatcattgtgtcgctcatcttc
gatggcgagctgaagggggacaagaacacatgcgccttgtccattatcctacctcagact
gagctgggcttctatctacctctgcatgccatctgtgtggagagactgaagcatgtcatc
cgcaagggacgcatttggatgcagaagggctacaacatcatctcggtgctaagcttggag
attgtccctatcatggagctgttggcctctatgaagacacacagtgtgccagaagatata
gatataaaagacaccgtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaggccatcagctctcatctgcagacttgcggctgttccatagtggttgggagc
aacccagagaaagtaaataagattgtacgaactctctgtctctttctcaccccggctgag
aggaagtgctctcgcctctgcaagaccgcctgctctttcaaatacgacacaggcctgttt
gttcagggtctgctcaaggactctacaggcagctttgtcctgcccttccgccaggtgctc
tactcgccttacccgaccacgcacatagacgtcgacatcaacacagtcaagcagatgcca
ccgtgccacgagcacacgtacaaccagcggcgctacatgcggtctgagctaagcgcgttg
tggaagacggacagcgaggacgacataccccctgacacagtcattcacactgacgaaacc
ttcacaccagacctgaatatatttcaagacgtcctgcataaagacactttggtgaagtca
tttatagatgaggtgttcatgctgaagccaggcctgtccctgcggagcacctatctggcc
cagttcctgctgctgctccacaggaaggccctcacactgctcaagtacatcgaggacgaa
acgcaaaaagggaagaagccgtttcgatcactgcgtaacctaaagacggacctagatctg
acgttggaaggagacctgaacattgtaatggccttcgctgaaaagctcagggcaggactg
cactcgtttgtgtttggcaagccgttctacaccagcatgcaagaacgagacgccctcatg
agcttttga
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