Etheostoma cragini (Arkansas darter): 117935825
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Entry
117935825 CDS
T07493
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117935825 (bcl11ba)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117935825 (bcl11ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
Zn_SUZ12
DUF3268
Motif
Other DBs
NCBI-GeneID:
117935825
NCBI-ProteinID:
XP_034714265
LinkDB
All DBs
Position
20:3900797..3944975
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AA seq
834 aa
AA seq
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MSRRKQGNPQHLSQREITQEVEHPDGGLLSSSLSLHPLRLPPHPLDPSLAHALPSGLHAD
HDLLTCGQCQMTFPLGDIVLFIEHKKKQCQTPLLANGCYDKMSDRGGEGGSPTLQSLHHN
AQRVELRKVVEPVEIGIQVTPEEEEVGRGVRGERTLIKGICPKQENTPAGGRDEPSSYIC
TTCKQPFPSAWFLLQHVQNTHNIRIYLESNPSSTALTPRITMPPPMGNDSIPQSPLTNFL
GDNNPFHLLRMTGPLLREPPPGFMENRLPNTPPFISPPPRHHLDSHRLERLSAEEMGLIS
QHPSAFERVMRLTPMAMESQSMDFSRRLRELAGNNNSTTPPLSPNRANPMHRLLNPNPFQ
PGPKSPFMSTPPLPPMPPNSTTPPQTQNKVKSCEFCGKTFKFQSNLVVHRRSHTGEKPYK
CQLCDHACSQASKLKRHMKTHMHKAGSLTGRSDDGLSTTSSPEPGTSDVTGEGMKNRDGD
FHGEGNEEEEEEEEEEELENESRPESNFSMESEFYRNRENGSKLPSEEKSSLAIEKMVEG
GGLNSIQQYNNLIVDNRKRMPFSKRGSDGQRDTGDEDSVAGEMDHHQQDERTTINGRNCG
SGDSFSGLFPRKPTPITSPSLSNSSNKRIKIEKDLDIPPAAHIPSENVYSQWLVGYAASR
HFIKDPFLGFTDSRQSPFATSSEHSSENGSLRFSTPPGDLLDGGLSGRSGTASGGSTPHL
GGGPGRPSSKDSRRCDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYACAQSSKLT
RHMKTHGQHGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLMTNEVKIEQAERT
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacgcaagcaggggaacccgcagcacctgtcccagagagaaataacacaggag
gttgagcatccagatggcggcctgctctccagctctctatccctccacccgctccgccta
cctccccacccgttggaccctagtctggcccacgccttgccatccggcctccacgccgac
cacgacctgctgacctgcggccagtgccagatgaccttcccgctgggcgacatcgtgctt
ttcattgagcacaagaagaagcagtgccaaacgccgctgctggccaatggctgctacgac
aagatgagcgaccggggaggagaaggagggagtccgactctgcagagccttcatcacaac
gcacagcgggtggagctgaggaaggtggtggagccggtggagattggcatccaggtgaca
ccagaggaggaggaggtggggagaggtgtgaggggagagaggacgctcatcaaaggaatt
tgcccgaagcaagagaacacaccggcagggggcagggatgagccttccagctatatatgt
accacatgtaagcagcccttccccagtgcctggttcctgctgcagcatgtccagaacacc
cacaacattcgcatatacctggagtccaacccctccagcacagccctcaccccacgcatc
actatgcctccacccatgggcaacgactccattccgcagtcccccctcaccaactttctc
ggggacaacaaccccttccatctcctgaggatgacgggccccctgctccgggagcctccc
ccaggcttcatggagaaccgcctccccaacacgcctccattcatcagtccgcctccccgg
caccacctggactcccatcggctggaacgccttagtgcagaagaaatgggcctcatctca
cagcaccccagtgcctttgagagggtgatgcggctaacgcccatggccatggagtcccag
tccatggacttttccaggcggttacgcgagttggcggggaacaacaacagcaccacacca
ccgttgtcacctaacagggccaaccctatgcaccgattactaaaccccaaccccttccag
cctgggccaaaatcaccctttatgagcacccctcccttaccaccgatgcccccaaacagc
accacgcctccccagacacagaacaaggtcaagtcctgtgagttctgcggtaagaccttc
aagttccagagcaacttggtggtgcatcgtcgcagccatactggagaaaaaccttacaag
tgccagctgtgtgaccacgcctgctctcaggcaagcaagctaaagcgacacatgaagacc
cacatgcacaaggctggatccctgacagggcgctcagatgatggtttgtccaccacaagc
tccccagagccaggcaccagtgatgtcacaggtgagggcatgaagaatagagatggggac
ttccatggggaaggcaatgaggaggaagaagaggaggaggaagaagaggaactcgagaat
gagagtcgaccagaatccaacttcagcatggagtctgagttctaccggaacagagagaat
ggctctaaactgccctcagaggagaagtcctcactcgccattgagaagatggttgaaggg
ggagggctcaactctatacagcagtacaataatttgatagttgacaatcgtaaaaggatg
cccttctccaagaggggctccgatggccagcgggatactggggatgaagactcagtggct
ggggagatggaccaccaccagcaggatgagaggacaaccattaacggccggaactgtggc
tccggtgactctttctcaggcctgtttccccgtaagccaacccctatcaccagtcctagc
ctgtccaactcctctaacaagaggatcaagattgagaaagacttggacatacccccagca
gcccacatcccctctgagaacgtctactcacagtggttagtgggctatgctgcctcacgg
cacttcatcaaagaccctttcctaggcttcactgactccagacaatcgccctttgccacc
tcctctgagcactcatccgagaacggcagcctgcggttctcgacgcctccaggcgacctg
ctggatggaggcctgtcgggccgcagtggcaccgccagtggcggcagcacacctcatctg
ggtggaggtccaggccgacctagctccaaggatagcaggaggtgcgacacctgtgaatac
tgcggcaaggtgttcaagaactgtagcaacctgacggtgcaccggcgcagtcacactggc
gagaggccctacaagtgtgagctgtgtaactatgcctgcgcccagagctccaagctcact
cgccacatgaagacacatggccagcatggtaaggaggtctatcgctgtgacatttgccaa
atgcccttcagcgtgtacagcactctggaaaaacatatgaaaaagtggcacggagaacat
ttgatgaccaatgaggtcaaaattgaacaagcagagagaacctaa
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