Etheostoma cragini (Arkansas darter): 117936494
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Entry
117936494 CDS
T07493
Symbol
pus3
Name
(RefSeq) tRNA pseudouridine(38/39) synthase
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117936494 (pus3)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
117936494 (pus3)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117936494 (pus3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
USHBP1_PDZ-bd
Motif
Other DBs
NCBI-GeneID:
117936494
NCBI-ProteinID:
XP_034715444
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All DBs
Position
21:complement(7891926..7895202)
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AA seq
471 aa
AA seq
DB search
MSEALIRRIQELEADLKKLKSQLKERRDAGDDLSPIEHTDCRPDSNTSSSRKGKKAGKER
PFDFSAQPRRHVALRLAYLGWSYQGFAVQENTDNTVEARVFEALLKTRLIQDRQSSNYHR
CGRTDKGVSAFSQVITIDVRSTQFCGGPGVTVPEHVDVSAKNKATGPELPYVKMLNRVLP
PDIRILDWAPVAEGFSARFDCQSRTYRYYFPRGSLDVTLMADAAKRYEGTHDFRNLCKMD
VGNGVLQFERTILSASVKPVQPQHINSTNQNDLFIFEIKGLAFLYHQVRCMMALLLLIGQ
KLEASDIINKLLDVQSNPRKPQYSMAVDYPLVLYDCHFEGLSWKQECEEVNHVLSALQHH
WTQSAIKTHVVHGMIQGLEAIGGVSSNHCWLVEGSKQRNYRPLLERPCCESLESRINHFV
KRGRLEQEEGENGSEMVHRGKRSKHSHVSPSLPVSSEMPVSKQSTDQKAED
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggctttaatcaggagaatacaggagctggaggcagacctgaagaagctcaag
tcccagctgaaggagaggagagacgctggagatgatctatctcctattgaacacacagac
tgcagacctgattctaataccagcagcagcagaaagggtaagaaagcaggcaaagagcgt
ccttttgacttttccgcccagcctcggcgccatgtggccctgcggctggcttacctggga
tggtcctatcaggggtttgcagttcaggagaacactgacaacactgtggaggcccgagtc
tttgaggctttgctgaagacgcggctgatacaggaccgacagagctccaactatcatcgg
tgtggacgtactgataaaggagtcagtgctttttcccaagtcataactattgatgtacgc
tccacgcaattttgtggaggacctggcgtcaccgtccctgaacatgttgatgttagtgcc
aaaaataaagctactggccccgagcttccatatgtgaagatgctgaacagagtcctgccc
ccggacattaggatcttggactgggcgccagtagcagagggctttagtgcacgctttgac
tgtcagtcccgcacgtaccggtactacttccctcgcggatccttggatgtaacgctgatg
gcagatgctgcaaaaagatacgagggcactcatgactttcgcaacctttgcaaaatggat
gtgggcaacggagttctgcagtttgagaggaccatcttgtcagcatcagtcaagccggtg
cagcctcagcacatcaacagcacaaatcaaaatgatctctttatatttgaaatcaaagga
ctggccttcctttaccaccaggtacgatgcatgatggcactgcttctcctgattgggcag
aaactggaagcctcggacataataaataagcttctggatgttcagagtaaccccaggaag
ccccaatacagcatggcagtagactacccgctggtgctgtacgactgccactttgaaggt
ttgagctggaaacaggagtgtgaagaggtgaaccacgtcctgtctgcactgcagcaccac
tggacccagagtgcaatcaagacccacgtcgtccatgggatgatccagggtttggaggcc
ataggtggtgtgtcctctaatcattgctggctagtagaaggcagcaagcagagaaactac
aggcccctgctggagcgtccatgctgcgagagcctggagtccagaataaaccattttgtc
aaaagaggcaggctggagcaggaggaaggggagaatggaagtgaaatggtccacagaggg
aaaaggtccaaacattcccacgtctcccccagtctgccagtttcttcagagatgccagtg
tcaaaacaaagtacagatcaaaaagcagaagattaa
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