Etheostoma cragini (Arkansas darter): 117937138
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Entry
117937138 CDS
T07493
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00514
Other types of O-glycan biosynthesis
ecra04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117937138 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117937138 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecra01003
]
117937138 (rfng)
Enzymes [BR:
ecra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
117937138 (rfng)
Glycosyltransferases [BR:
ecra01003
]
Glycan extension
O-Glycan
117937138 (rfng)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
117937138
NCBI-ProteinID:
XP_034716742
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All DBs
Position
21:17348455..17364596
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AA seq
418 aa
AA seq
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MNPLHWPVRMHIASVGVSKFCFLFSLAFCGLLLLLIPAFQPPARQVDLPQPRPQVRPAKA
VPSHLVEVPGVSVHVGETDSATESNVSSAEQGRSVDTEGTRNDIHSPKRGMDSKTVPLPG
GKGGPFSGSKSRDRLEVKDIFIAVKTTRKYHKSRLELLIQTWVSQANDQLLKAISKSCCR
TKSFSVERWRFNYRNTLPPLHPQMPRSERMEMFQFSLCSTALLIPGSVARWFCHVDDDNY
VILPSLLRLLSSYHHSQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRG
LALKMSPWASLGNFISTAEKIRLPDDCTIGYIIEALLEVTLTHTHLFHSHLENLPKLPTD
TVLDQVTLSFGGFKNKRNVVSIVGGFSLAEDPTRFKTVHCLLYPDTNWCPTLAHRHIN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgctccattggccagtcaggatgcacatagcttccgtgggtgttagcaaattc
tgcttcctgttttcccttgcattctgcggcctcctgcttctgctcatccctgccttccag
cccccggcgcggcaagtggacctgcctcagccccgaccccaagtcagacctgcaaaggca
gtcccatcacacctggttgaggttcccggagtgtctgtccatgtcggggaaactgactcg
gccacagagtctaacgtgagctcagcagagcaggggagatccgttgacactgaaggtacc
aggaatgatatccatagtcccaagagggggatggactccaaaactgtacctctccctgga
ggaaagggtggtccattttcagggtctaagtcccgggaccggttagaggttaaggacatt
tttattgcagtgaagacaaccaggaagtaccacaagtcaagactggagctgctgattcag
acctgggtttcccaagctaacgaccagctattaaaagcaattagtaagtcctgctgccgg
acaaagagcttcagtgtggagagatggaggtttaactacagaaacactctgcccccactt
cacccacaaatgccacggtcagagaggatggagatgttccagttcagtttgtgctcaaca
gctctgctcataccgggctctgtggccaggtggttctgccacgtggatgatgataactat
gtgatcctgcccagcctgctgcggctgctctcctcctaccaccacagccaggatgtctac
ctgggccgacccagcctggatcatcctatagaggctgccgagagggtcaagagtgacggc
tcggtgtctgtcaagttctggtttgccacaggtggagcaggtttctgtatcagcagaggc
ctggcactgaaaatgagcccatgggccagtttgggaaatttcatcagcacggcagagaag
atccgactgccagacgactgcaccatcggctacatcatcgaagcgctgctggaggtgacc
ctcacacacacacacctcttccactctcacctggagaacctaccgaagctgcccacagac
acggtgctggatcaggtgactctcagcttcggaggctttaaaaacaaaagaaatgtggtc
agcattgttggaggcttttccctggctgaggaccccacaaggttcaagacggtgcactgc
cttctgtatccagatactaactggtgtccaacgctcgcacatcgccacataaactga
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