Etheostoma cragini (Arkansas darter): 117937272
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Entry
117937272 CDS
T07493
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117937272
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117937272
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GFIT
Motif
Pfam:
LSDAT_euk
Ion_trans
LSDAT_prok
Motif
Other DBs
NCBI-GeneID:
117937272
NCBI-ProteinID:
XP_034716989
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Position
21:complement(10902048..10919997)
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AA seq
1259 aa
AA seq
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MADTGENSGEQVSNVTSKDQTWISKIIKKRVCTTFVEDCSSNGERCQCGGARDAHGSVAL
GDYFSTAIVNHWDSAQHSSEYPTDAYGELQFEGVSKRHSYFLRLSCDTPPAMVYSLMTAH
WGLPIPNLVVSIVGGEGRTKVKTWVREVIRQGLVKASQSTGAWIITPGLREGIARCVGEA
VRDHATAASSVSLNKVVALGITSWGLVHNREQLVNPQGSFPAKYHVQNMYQDTCCLDINY
QAFLLVDDGSVRPRAETGFRAKLEDYISRQRTGGESGIDIPVLCMLISGEARMLESVDLS
LKTSMPWLVLAGSGGLADFLSDVVENLSSGQVGQSSGDGDGEAGPSVDLKDNVAERVRRH
FPSEAESDKLVEWALSIYQHRDLITIYHGEKDSPNEFDTLLLKTLVGASRHRASEEDSPY
NDELKLAVTWNRVGFAKSELFNGDIQWKYEDLEASMTDALINNKPQFVRLFTENGLNILD
YLTYGRLESLYCSVAEGTLLYQLLQQQLAERLAAAPESNRQFSPSKVAKKKKGGPGTEIS
LFEVAELLELLMGDICQPFYYDALGLEQTSVKSRVFRRASKVLQGECLYRRKRCLSPWAS
LFIWSVLQKRSEMAHYFWEMAGESVLSALGGCKILRELSKLETETEAKLSTKDLAQKFEN
LAHDVFGSCYRSNESRSFTLLIRKSVVWGGTTCLQMGMGADARLFFSHDGVQTLLSQIWW
GDMQRNTEVWKLLLTFSCPILCYTNLISFRKQEKEEEEEEDGEGEPDEDGLGRDSHSLYG
NTVFSFADINHMEVDTPGPNSRTAAIKGRLHSHRPPKRPYVVSRWRQFWFAPVTAFLGNV
LMYFLFLLLFAYVLLVDFNPVSASGPAISEYVLYFWVFTFVCEEIRQTLFLGSMSYRQRM
RVYIQDVWNKFDITAITLFIIGVICRMFKQSYGFGRDTLCVGFMVFTLRLLHIFAIHKQL
GPKIIIVGKMMKDVFFFFFFMMVWLIAYGVANQALLYSYDPNLDRIFRRVFYRPYLHIYG
QIPVEEMDVKKSWDRDCTHNVTLIQSGDEPCRTLSNNWLVVILLVLYLMVTNILLINLLI
AMFSYTFNKVQANGDIYWKFQRYNLIVQYHSLPSLAPPFIILSHINIFIKRVIRKVPSFK
MLHFVLQLRGKAANRLMTWENIQKEDFLSAQNRLQRSSDSEKLKRMSVKVDDVLKHVTES
RGFDHRLRALENEMEYCSHALSWIVDTLAQSSTFKPSRPPPTMHQPHLPVPLDSSLGIP
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaccggagaaaacagcggagagcaagtcagcaacgtcacatctaaggaccag
acttggatctccaaaatcatcaagaaaagagtgtgtaccacctttgtagaagattgttcc
agtaatggtgaacgctgccagtgcgggggtgcgagagatgcccatggctctgtggctctc
ggtgactatttcagcacagcgattgtcaaccactgggacagcgcccagcactcctcagaa
tacccgacggatgcctatggagagttgcagttcgaaggagtcagcaagaggcatagctat
tttctacgtctgtcatgcgacacccccccggctatggtctacagcctgatgacagcccac
tggggtcttcctatacctaacctggtggtttctatagtgggcggagaaggcaggacaaag
gtgaagacttgggtgcgggaagtcatcagacagggactggtgaaagcctcacaaagcaca
ggagcgtggatcataacgccaggcttgcgtgaaggtattgccaggtgtgttggagaggcg
gtgagggatcatgcaaccgcagcctcgtctgtgtccctcaacaaggtggtggcgctgggc
atcacttcctggggcctggtgcataacagagagcagctggtcaaccctcagggcagcttt
cctgctaagtaccatgtccagaatatgtatcaggacacttgctgccttgatatcaactac
caggctttcctgctggtggatgacgggagtgtgcgacctagagcagagacagggttcagg
gccaaactggaggactacatctcccgccagcgcacgggtggcgaaagcggcatagacatc
cctgtcctttgtatgctgatatcaggggaggcaagaatgctggagagtgtggatctttcc
ctgaagacctccatgccttggctggtgcttgctggctctggaggcctggctgacttcttg
agcgatgtcgtggagaatctgtcatcaggtcaagttggccagtcttccggcgacggagat
ggcgaggcgggtcccagcgtagatctgaaagacaatgtggcagaaagggttaggcggcac
ttcccttctgaagcggagtcagacaaactagttgaatgggctctgagcatctaccagcac
agagacttaattacaatctaccatggagagaaggacagcccaaatgagtttgatacactc
ctgctcaaaacattggtgggagctagtaggcatcgtgcgtcagaggaggacagcccttac
aatgatgaactgaagctagctgtcacatggaacagggttggctttgccaaaagtgaactc
ttcaatggagacatccaatggaagtatgaagacttggaagcctccatgacagatgccctg
ataaacaacaagcctcagtttgtgcgtcttttcactgagaatggcctcaacattctggac
tacctgacttatggcaggctggaaagcctctactgctccgtggctgaagggacattgctc
taccagctacttcagcaacaactagcggagcggctggcagctgcacctgaatcaaaccgg
cagttctccccttccaaagtggcaaaaaagaaaaagggtggcccagggacggagatcagc
ctttttgaggttgcagagctcctggaactgttaatgggtgacatctgccagccattttac
tacgatgctttgggcttagaacagacatcagtcaagagtagagtttttaggcgtgccagt
aaggttctgcaaggagaatgcttgtatcgcaggaagcgctgcctctccccttgggcttcg
ctcttcatctggtccgtcctccagaaacgcagcgagatggcccattacttctgggagatg
gcaggggagtctgtgctgagtgctcttggtggctgtaagattctgagggaactttccaag
ctggagacggagactgaggccaaactgtccacaaaagacctggcccagaagtttgagaac
ctggcacatgatgtttttggctcttgctatcggagcaatgagagtcgctcattcaccctg
ctaattaggaaatctgtagtatggggtgggaccacctgcctccagatgggcatgggcgcc
gacgcccgacttttcttcagtcacgacggagtacagactctgttgtcccagatctggtgg
ggtgacatgcagaggaacacggaggtgtggaagctcttactcaccttctcatgccccatc
ctatgctacaccaacttaatctcctttaggaaacaagagaaagaggaagaagaagaggag
gatggggagggggagcctgacgaggacgggctgggcagggacagccacagcctctatggc
aacaccgtcttctctttcgccgacatcaaccacatggaagttgatacaccaggaccaaac
agcaggacagcagccatcaaaggcagactccactctcacagacccccaaagcgtccatat
gtagtgtcaagatggcgacagttctggtttgcacctgtcaccgcatttttgggcaatgtc
ctgatgtacttcctcttcctcctgctgtttgcgtatgttttgctggtggacttcaaccct
gtgtctgcttctggtccggccatctcggagtatgtgctatacttctgggtattcactttt
gtgtgtgaggagatccgacagacattatttttggggtcgatgagttaccgtcagaggatg
agagtgtacattcaggatgtgtggaacaagtttgacatcactgccatcacgctgttcatc
ataggagtaatctgcaggatgtttaagcagtcatatggatttggcagggataccctgtgt
gtgggttttatggtcttcacccttcgtctccttcacatctttgccattcacaaacagctg
gggccaaaaatcatcattgttggcaagatgatgaaggatgtcttcttcttctttttcttc
atgatggtgtggctcatagcatatggagtagccaatcaggctttgctttactcctacgac
ccaaacttagatcgcatctttcgccgggttttctacagaccgtacttgcacatctatgga
cagatccctgtggaagagatggatgtaaaaaagtcatgggacagggactgcacacacaat
gtgacgttgatccaaagtggtgatgagccatgcaggactctgtctaataactggctggtg
gtaattctgctggtactttatctgatggtcaccaatatcctgctcatcaacttgctcatc
gccatgttcagctacaccttcaataaagtgcaggctaacggcgacatctactggaagttc
cagcgctacaacctgattgttcagtaccactcccttccctccctcgctcctcctttcatc
atcctctctcacatcaacatctttatcaagagggttatccgcaaggtgccctctttcaag
atgctgcactttgtattgcagttaagagggaaagccgctaacaggctaatgacatgggaa
aacattcagaaggaggacttcctgtctgcccagaacaggctccagaggagctctgactca
gagaagctcaaacggatgtctgtcaaagtggacgatgtgcttaaacatgtgactgaaagc
agaggatttgaccacaggctgagggctctggagaatgagatggaatattgttcacatgct
ctcagctggattgtggatactttggcacaaagcagcacgttcaaaccttctcgtcctcca
cctacaatgcatcaaccccatcttccagttccacttgattcatctttagggataccttaa
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