Etheostoma cragini (Arkansas darter): 117937550
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Entry
117937550 CDS
T07493
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117937550 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ecra04050
]
117937550 (tnfrsf11a)
04090 CD molecules [BR:
ecra04090
]
117937550 (tnfrsf11a)
Cytokine receptors [BR:
ecra04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117937550 (tnfrsf11a)
CD molecules [BR:
ecra04090
]
Proteins
117937550 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
117937550
NCBI-ProteinID:
XP_034717485
LinkDB
All DBs
Position
22:10373746..10385673
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AA seq
669 aa
AA seq
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MRLNFSTRWIVRGWTTCVLVTFYAQNAVPKSLQCEETHYYKSSRCCNKCEPGFRVLKDCT
DSHKTICVKCNLGEYQPGLTENTRCLQQKFCDPGKGFMERPENLVAEEPCRCPAGFQCHP
INCEYCERIPTCSAGYGLEVDPDSTNERQTCVACKKGFFSADNTAEQCRQWTNCKAEGRN
ETRPGSAQADAVCGPLTSGKTGAAPSWVIVSMLSVITVLCLLILLLFCYKDKLKLLSVNL
RSCVQNLKRTRIQQDTLAPLYHSGSGGTGAGPKGSPCEMTKLICQAPHSPADELPCIFPT
SVPDVRVSLPFLGEMKEEEGNNGKTVMADQRKGSGEPEEVSEEEEVVSVSPLLAGSCVCV
IPVLEPLEVGENEDCSQAVSPGTPGTCSCGGLDGERDGYESGKEEKSGSIRADNSGESGE
GNQTKRVLSKSETGVTSLVSLSPRLLHTSSVIPPSSPLPELCLPLSQAQVRAEFKPQLTD
SSLVKQEELYRLASTDSTSTENCTISSMTSVSPLMTSSSDGDLYLDKPPEDLSLEQGQGL
SWGDNRGNKLSSGESELECSPESLHSQLAEPTLTLGQVSGNHNKTFISSGQVMNFSGDVI
VVHVSQTSLGSDGAEQDDAFGRPVQEESNETAPFFQNSLRLQMDSICQSTLQDNTLLVKG
MVEACPLGK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagactgaacttttctacaagatggatagtccgaggctggacaacatgcgtcctcgtc
accttttacgcacagaatgctgtccccaaatctctccagtgtgaggaaacacattattat
aaaagctccagatgctgcaacaagtgtgaaccaggcttccgtgtgttaaaggactgtacc
gattcccacaagactatatgtgttaaatgtaatcttggagaataccagcccggcttgact
gaaaacacgcgctgtctacagcaaaagttctgtgacccaggtaaggggtttatggagagg
cctgaaaaccttgtggcagaggagccgtgtcgctgccctgccggtttccagtgccacccc
atcaactgtgagtactgtgagaggatacccacctgcagtgctggatatggacttgaggtg
gaccctgactctactaacgaaaggcagacatgtgttgcatgtaagaaaggcttcttctct
gctgacaacactgccgaacaatgccgacaatggactaattgtaaggctgagggccggaat
gaaacacggccagggagcgctcaggctgatgcagtgtgtggaccacttacctctgggaag
acaggtgcagcaccctcctgggttatcgtttcaatgctctcagtcatcacagttctgtgt
ctccttatcctgctcctcttctgctacaaggacaaactaaaattactctctgtaaatctg
cggtcctgtgtccagaatctaaagaggactaggatacaacaggataccttggcccctctt
taccacagtggatcaggaggaacaggagcaggccccaaaggttctccatgtgagatgacc
aaactcatctgccaagcaccccacagccccgctgatgagctcccatgcatcttccccact
tctgttcccgatgtcagggtgtcactgccattcttgggggaaatgaaagaggaagaaggg
aacaatgggaagactgtgatggcagatcagaggaaagggtctggagaacctgaggaggtg
tcagaagaggaggaggttgtgagtgtgtctcctcttttggcaggttcctgtgtgtgcgtc
attcccgtccttgagccattggaagtaggggagaatgaggactgtagccaggctgtcagc
ccagggactccaggaacctgctcgtgtggcgggctagacggagaaagggatggatatgag
agtgggaaagaggagaaaagtgggagtataagagcagacaatagtggagaaagtggtgag
ggaaatcaaacaaagagggttttgtccaagagtgagacaggtgttacatctcttgtctcc
ctttctcctcgactcctccacacctcctccgtaatccctccatccagtccactgcctgaa
ctctgcctgccgttgtctcaggctcaggtgagagcagagttcaaacctcagctgactgac
agctcactggtaaaacaggaggaattatacagactggcaagcacagactccacctcaaca
gagaactgtaccatctcttccatgacctcggtcagccccttgatgacttcctcttctgat
ggcgatctctacctggacaagccccctgaagacttgagcctggagcaaggccagggactt
tcctggggggataacaggggaaacaagctctcctctggggagtcagaattggagtgctca
cctgagagcctccatagtcagctggctgaaccaactcttaccttaggtcaggtgtctggg
aaccacaacaaaaccttcatctccagcggtcaggtgatgaactttagtggggatgtcatc
gtcgtccatgtcagccagacgtctcttggcagtgacggggcagagcaagacgatgcgttt
gggagacctgtccaagaagagtccaatgagacagccccatttttccaaaacagcctgagg
ttacaaatggactccatttgccaaagcaccttacaagataatacactgctggtcaaggga
atggtggaagcgtgtcctctgggaaagtga
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