Etheostoma cragini (Arkansas darter): 117938210
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Entry
117938210 CDS
T07493
Symbol
flt1
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04020
Calcium signaling pathway
ecra04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117938210 (flt1)
04020 Calcium signaling pathway
117938210 (flt1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117938210 (flt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecra01001
]
117938210 (flt1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117938210 (flt1)
Protein kinases [BR:
ecra01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
117938210 (flt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
VEGFR-1-like_Ig-like
ig
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_4
Izumo-Ig
Ig_5
C1-set
Haspin_kinase
PapD-like
Motif
Other DBs
NCBI-GeneID:
117938210
NCBI-ProteinID:
XP_034718602
LinkDB
All DBs
Position
22:13388688..13429209
Genome browser
AA seq
1273 aa
AA seq
DB search
MMNFIPICLLCGLYGVLAKDKDQKGKYSVPILDVKTRQLVLNINQTLQLSCRGRWELTWA
FPSGLTKDQVQVEESRCGRTSQQYCSRLMVISTQTQHTGFFLCRYRHRTQKQTSIYVYVT
YSQQPFVEHPGMSPDVLYMKEKQPLVIPCRVTHPNATTTLVKFPDHSLSPDQRNIIWNSK
QGFTIRTPTFYYIGLFYCQTITDGVTHNSRRYFVHRPVSNIMEVYLNSSGPVQALKGERL
VLNCTATGELNTRVNITWDYPGKNNNTGSMSKRLLKHRTHMLFYNILTIPKLQRSDRGLY
TCHVTSGEKHKQQKVTVTVHDRPFIRLKSRHGSTMEAQAGQKSYRISPKLRAFPAPAVIW
LKDGMVAAEQCSRYHMDGNSLVIRDVAEEDAGKYTVLVQIQEHGLYQNLTLTLVVNVSPQ
IGEKAVSLQDPGSVPRGSRQALHCTSHGVPPPHIQWLWHPCPSKGLCVCPTSSSLWSPVT
ERVPATFTSNHILSITHRQEVLQGKKKTVGVLTVAEAFVSGVYRCTASNSAGTDQLDLHF
YVTDVPGGFSVSQGEEPREGGELHLTCVANKYLYTALSWQRVNETEGVQSRSPARSSQQL
TLGEFSNSLVLLLSNLTARDSGAYRCSAHHLIIGREAHLDIQVVVTILEPPVLLNNLTDC
TVNLSSSVILSCPSKGVPTPIIMWYKDERALSQGSGIVISTEDGTLHIDRITVEDQGMYT
CQATNERGSAESSAYIWVNRASEASFLEIPTLTCTCVVATFFWLLLTLFIRKLKQPNSSN
TKPEHLSIILDRGEGPIEEQCERLQYDPNQWEFPRERLKLGKPLGRGAFGKVMQAAAFGI
DNNTSCRTVAVKMLKDGATASEHKALMTELKILNHIGHHLNVVNLLGACTKPGGPLMVIV
EYCCYGNLSNFLKGKREVFVYNTPAGGKDGGPGCFGRVSEFDSRDKKDNQLDAESASNSP
LFLEDLISFSFQVARGMEFLASRKCIHRDLAARNILLSDNKVVKICDFGLARDIYKDPDY
VRKGDARLPLKWMSPESIFDKVFTTQSDVWSYGILLWEIFSLGASPYPGLHIDEEFCHRL
KGGTRMRAPEYSTTEIYSTMLACWEASPSDRPTFTNLVETLGDLLQARVQQDGKDYIPLG
SFMTGNTGRSESFKENLLAVTNMSYMRGMATLQTFEELPFEEPDSPDDEQSDSGMILPSE
ELKRLMWNKGTKNRKLSRLFTFANCPDNQVPFLCNYITGVSDDKPSILPCDWGSDEGGSP
PPDYNSAFLYPSL
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattttatccccatctgcctgttatgtggattgtatggtgttcttgcaaaagac
aaagatcaaaaggggaaatacagcgttcctattctggatgtgaaaacccggcagctggtc
cttaacatcaaccagacactacagctcagctgcaggggtcgctgggagctgacatgggcg
ttcccatcaggtttgaccaaagatcaggtgcaagtggaggagtctcgctgtgggaggaca
agccagcagtattgcagtcgtttgatggtcatcagcacccagacccagcacactggcttt
ttcctctgcagataccgacaccgaactcaaaaacagacctccatctatgtatatgtcaca
tacagccagcagccatttgtggaacatccgggtatgagcccagatgtgttgtacatgaag
gagaagcagccactggtcatcccctgccgggtcacccaccctaacgccaccaccacattg
gtcaagttccccgaccacagcctgagtccagaccagaggaacatcatctggaacagcaag
cagggcttcaccatcagaactcctaccttctattacattggcctcttctactgccagaca
atcactgatggtgtcacacacaactcacgtagatactttgtacacagaccagtgagtaac
atcatggaggtctacctgaacagcagtggccctgtgcaggccctgaaaggagagagacta
gttttgaactgtactgccaccggggagttgaacaccagagtcaacatcacctgggactac
cccggaaagaataacaacacaggctccatgtccaagaggctcctgaaacacagaacgcac
atgttgttctacaatattctgaccatcccaaagctccagcgttcagaccgaggcctctac
acatgccacgtgaccagtggggaaaaacacaaacaacagaaagtcactgttacagtccat
gaccgtccgtttattcgcctgaagtccagacatggatctacgatggaggcgcaggcagga
cagaaatcttatagaatctctcccaaactacgagcgttccctgcccctgcagtcatctgg
ttgaaggatggcatggtggcagcagagcaatgctcccgatatcacatggatgggaattcc
cttgtgatccgggatgtggcagaggaggatgctgggaagtacactgtcctggtacaaatc
caggaacatggactctaccagaatcttacgctcactcttgtggtcaatgtgagtcctcag
ataggggagaaagcggtgtcgttgcaggacccgggctcggtgccacgggggagcagacaa
gcactccactgcacatcccatggagtgcctcctccacacatccagtggctatggcatccc
tgcccatccaaaggcctgtgtgtgtgtccaacatcctcctccctttggagccctgttaca
gagagggtccctgccacgttcacaagcaaccacatcctgagtattacacacagacaggaa
gtgcttcaagggaagaaaaagacagtgggggtcctgactgtggcagaggcctttgtgtct
ggagtctatcgctgcactgcctccaactctgcaggcacagaccagctagacctccacttc
tacgtcacagatgtcccaggaggtttcagtgtgagccagggggaggagcctagagagggt
ggcgaactccatctcacctgtgtagctaataagtacctgtacacagcgttgtcatggcaa
cgggtgaatgagaccgagggtgtccaatcccgcagccctgcccgcagcagtcagcagctc
acattgggggagttttccaattctctggtcctgttgctaagcaacctaacagccagagac
tccggcgcctacagatgctctgcccaccacctgatcatcggacgggaggcacacctggac
atacaggtggtggtcacaattctggagcctccggtgctgcttaacaatctcacagattgt
actgtcaacctcagcagctcagtaatccttagctgtccctctaaaggagtcccaacccca
atcatcatgtggtacaaggatgaacgtgctttgtctcagggatcaggtattgtgatatca
acagaagatgggaccctccatattgatcgaatcacagttgaagaccagggcatgtataca
tgccaggccaccaatgaaaggggatctgcagagagttctgcctatatatgggtaaaccgt
gcctcagaggcctcatttctggagattccgacacttacctgtacctgtgtggtggccact
ttcttctggcttttgctgacgcttttcatacggaaactgaaacagcccaacagctcaaac
accaaaccagagcacctgtcaatcattctggacagaggggaggggccaatagaggagcag
tgtgagagactacaatacgaccccaaccaatgggagttccctcgagagcggcttaaatta
gggaaacctctgggccgtggagcctttggtaaggtgatgcaggcagctgcatttggtata
gacaacaacaccagctgcaggactgtggctgttaaaatgctcaaagatggagctacagcc
agcgaacacaaagctctgatgactgaattaaaaatcctcaaccacattggacatcatctc
aatgtagtcaacctactgggagcctgcaccaagccgggaggaccactgatggtcattgtg
gagtactgttgctatggaaatctttctaacttcttgaagggcaagagagaggtgtttgtg
tacaacacgccggcaggaggaaaggacggagggccaggttgttttggcagagtgtctgag
tttgattcgagagacaagaaagataatcaacttgatgccgaatctgcctccaactcccct
ttattcctggaggacctcatctcctttagcttccaggttgcgcgaggaatggagtttctc
gcctctcgcaagtgtattcaccgagacctggcagccagaaacattttgctttctgataat
aaagtggttaagatctgtgactttggcctggccagagacatctacaaagaccctgactat
gtccgcaagggagatgcccgcctccctctaaagtggatgtctccagagtccatctttgac
aaggtgttcaccacgcagagtgacgtgtggtcctatggcattctgctgtgggagatcttt
tctttgggtgcttccccttaccctggtcttcacatagatgaagagttctgccacagacta
aaggggggaacaaggatgcgagcgcctgaatacagcactactgagatttacagcacaatg
ctggcatgctgggaggccagtccctcagatcgacccaccttcactaacctggtggagacc
ctgggagacctgctgcaagcgagagttcagcaggatggaaaggattacattcctctggga
tctttcatgactggaaacactggtcgcagcgagtccttcaaagaaaacctgcttgcagtc
acaaacatgagttatatgaggggtatggccacacttcagacgtttgaggaactgcccttc
gaggagccagacagccctgacgatgagcagagtgacagtggcatgatcctcccatctgag
gagctaaagcgtctgatgtggaataaaggcaccaagaacaggaaactcagcaggttattt
acctttgctaactgcccggacaaccaggtgcctttcctgtgcaattacatcacaggtgtc
tctgatgacaagccgtctatcttgccgtgtgattgggggtctgacgagggtggctcccct
cctccggattacaactctgcttttctatatccctccctctaa
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