Etheostoma cragini (Arkansas darter): 117938210
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Entry
117938210 CDS
T07493
Symbol
flt1
Name
(RefSeq) vascular endothelial growth factor receptor 1 isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04020
Calcium signaling pathway
ecra04510
Focal adhesion
ecra04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117938210 (flt1)
04020 Calcium signaling pathway
117938210 (flt1)
09133 Signaling molecules and interaction
04518 Integrin signaling
117938210 (flt1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117938210 (flt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecra01001
]
117938210 (flt1)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117938210 (flt1)
Protein kinases [BR:
ecra01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
117938210 (flt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
VEGFR-1-like_Ig-like
ig
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
Ig_PDGFR_d4
Ig_4
Ig_5
C1-set
Haspin_kinase
PapD-like
Motif
Other DBs
NCBI-GeneID:
117938210
NCBI-ProteinID:
XP_034718602
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All DBs
Position
22:13388688..13429209
Genome browser
AA seq
1273 aa
AA seq
DB search
MMNFIPICLLCGLYGVLAKDKDQKGKYSVPILDVKTRQLVLNINQTLQLSCRGRWELTWA
FPSGLTKDQVQVEESRCGRTSQQYCSRLMVISTQTQHTGFFLCRYRHRTQKQTSIYVYVT
YSQQPFVEHPGMSPDVLYMKEKQPLVIPCRVTHPNATTTLVKFPDHSLSPDQRNIIWNSK
QGFTIRTPTFYYIGLFYCQTITDGVTHNSRRYFVHRPVSNIMEVYLNSSGPVQALKGERL
VLNCTATGELNTRVNITWDYPGKNNNTGSMSKRLLKHRTHMLFYNILTIPKLQRSDRGLY
TCHVTSGEKHKQQKVTVTVHDRPFIRLKSRHGSTMEAQAGQKSYRISPKLRAFPAPAVIW
LKDGMVAAEQCSRYHMDGNSLVIRDVAEEDAGKYTVLVQIQEHGLYQNLTLTLVVNVSPQ
IGEKAVSLQDPGSVPRGSRQALHCTSHGVPPPHIQWLWHPCPSKGLCVCPTSSSLWSPVT
ERVPATFTSNHILSITHRQEVLQGKKKTVGVLTVAEAFVSGVYRCTASNSAGTDQLDLHF
YVTDVPGGFSVSQGEEPREGGELHLTCVANKYLYTALSWQRVNETEGVQSRSPARSSQQL
TLGEFSNSLVLLLSNLTARDSGAYRCSAHHLIIGREAHLDIQVVVTILEPPVLLNNLTDC
TVNLSSSVILSCPSKGVPTPIIMWYKDERALSQGSGIVISTEDGTLHIDRITVEDQGMYT
CQATNERGSAESSAYIWVNRASEASFLEIPTLTCTCVVATFFWLLLTLFIRKLKQPNSSN
TKPEHLSIILDRGEGPIEEQCERLQYDPNQWEFPRERLKLGKPLGRGAFGKVMQAAAFGI
DNNTSCRTVAVKMLKDGATASEHKALMTELKILNHIGHHLNVVNLLGACTKPGGPLMVIV
EYCCYGNLSNFLKGKREVFVYNTPAGGKDGGPGCFGRVSEFDSRDKKDNQLDAESASNSP
LFLEDLISFSFQVARGMEFLASRKCIHRDLAARNILLSDNKVVKICDFGLARDIYKDPDY
VRKGDARLPLKWMSPESIFDKVFTTQSDVWSYGILLWEIFSLGASPYPGLHIDEEFCHRL
KGGTRMRAPEYSTTEIYSTMLACWEASPSDRPTFTNLVETLGDLLQARVQQDGKDYIPLG
SFMTGNTGRSESFKENLLAVTNMSYMRGMATLQTFEELPFEEPDSPDDEQSDSGMILPSE
ELKRLMWNKGTKNRKLSRLFTFANCPDNQVPFLCNYITGVSDDKPSILPCDWGSDEGGSP
PPDYNSAFLYPSL
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattttatccccatctgcctgttatgtggattgtatggtgttcttgcaaaagac
aaagatcaaaaggggaaatacagcgttcctattctggatgtgaaaacccggcagctggtc
cttaacatcaaccagacactacagctcagctgcaggggtcgctgggagctgacatgggcg
ttcccatcaggtttgaccaaagatcaggtgcaagtggaggagtctcgctgtgggaggaca
agccagcagtattgcagtcgtttgatggtcatcagcacccagacccagcacactggcttt
ttcctctgcagataccgacaccgaactcaaaaacagacctccatctatgtatatgtcaca
tacagccagcagccatttgtggaacatccgggtatgagcccagatgtgttgtacatgaag
gagaagcagccactggtcatcccctgccgggtcacccaccctaacgccaccaccacattg
gtcaagttccccgaccacagcctgagtccagaccagaggaacatcatctggaacagcaag
cagggcttcaccatcagaactcctaccttctattacattggcctcttctactgccagaca
atcactgatggtgtcacacacaactcacgtagatactttgtacacagaccagtgagtaac
atcatggaggtctacctgaacagcagtggccctgtgcaggccctgaaaggagagagacta
gttttgaactgtactgccaccggggagttgaacaccagagtcaacatcacctgggactac
cccggaaagaataacaacacaggctccatgtccaagaggctcctgaaacacagaacgcac
atgttgttctacaatattctgaccatcccaaagctccagcgttcagaccgaggcctctac
acatgccacgtgaccagtggggaaaaacacaaacaacagaaagtcactgttacagtccat
gaccgtccgtttattcgcctgaagtccagacatggatctacgatggaggcgcaggcagga
cagaaatcttatagaatctctcccaaactacgagcgttccctgcccctgcagtcatctgg
ttgaaggatggcatggtggcagcagagcaatgctcccgatatcacatggatgggaattcc
cttgtgatccgggatgtggcagaggaggatgctgggaagtacactgtcctggtacaaatc
caggaacatggactctaccagaatcttacgctcactcttgtggtcaatgtgagtcctcag
ataggggagaaagcggtgtcgttgcaggacccgggctcggtgccacgggggagcagacaa
gcactccactgcacatcccatggagtgcctcctccacacatccagtggctatggcatccc
tgcccatccaaaggcctgtgtgtgtgtccaacatcctcctccctttggagccctgttaca
gagagggtccctgccacgttcacaagcaaccacatcctgagtattacacacagacaggaa
gtgcttcaagggaagaaaaagacagtgggggtcctgactgtggcagaggcctttgtgtct
ggagtctatcgctgcactgcctccaactctgcaggcacagaccagctagacctccacttc
tacgtcacagatgtcccaggaggtttcagtgtgagccagggggaggagcctagagagggt
ggcgaactccatctcacctgtgtagctaataagtacctgtacacagcgttgtcatggcaa
cgggtgaatgagaccgagggtgtccaatcccgcagccctgcccgcagcagtcagcagctc
acattgggggagttttccaattctctggtcctgttgctaagcaacctaacagccagagac
tccggcgcctacagatgctctgcccaccacctgatcatcggacgggaggcacacctggac
atacaggtggtggtcacaattctggagcctccggtgctgcttaacaatctcacagattgt
actgtcaacctcagcagctcagtaatccttagctgtccctctaaaggagtcccaacccca
atcatcatgtggtacaaggatgaacgtgctttgtctcagggatcaggtattgtgatatca
acagaagatgggaccctccatattgatcgaatcacagttgaagaccagggcatgtataca
tgccaggccaccaatgaaaggggatctgcagagagttctgcctatatatgggtaaaccgt
gcctcagaggcctcatttctggagattccgacacttacctgtacctgtgtggtggccact
ttcttctggcttttgctgacgcttttcatacggaaactgaaacagcccaacagctcaaac
accaaaccagagcacctgtcaatcattctggacagaggggaggggccaatagaggagcag
tgtgagagactacaatacgaccccaaccaatgggagttccctcgagagcggcttaaatta
gggaaacctctgggccgtggagcctttggtaaggtgatgcaggcagctgcatttggtata
gacaacaacaccagctgcaggactgtggctgttaaaatgctcaaagatggagctacagcc
agcgaacacaaagctctgatgactgaattaaaaatcctcaaccacattggacatcatctc
aatgtagtcaacctactgggagcctgcaccaagccgggaggaccactgatggtcattgtg
gagtactgttgctatggaaatctttctaacttcttgaagggcaagagagaggtgtttgtg
tacaacacgccggcaggaggaaaggacggagggccaggttgttttggcagagtgtctgag
tttgattcgagagacaagaaagataatcaacttgatgccgaatctgcctccaactcccct
ttattcctggaggacctcatctcctttagcttccaggttgcgcgaggaatggagtttctc
gcctctcgcaagtgtattcaccgagacctggcagccagaaacattttgctttctgataat
aaagtggttaagatctgtgactttggcctggccagagacatctacaaagaccctgactat
gtccgcaagggagatgcccgcctccctctaaagtggatgtctccagagtccatctttgac
aaggtgttcaccacgcagagtgacgtgtggtcctatggcattctgctgtgggagatcttt
tctttgggtgcttccccttaccctggtcttcacatagatgaagagttctgccacagacta
aaggggggaacaaggatgcgagcgcctgaatacagcactactgagatttacagcacaatg
ctggcatgctgggaggccagtccctcagatcgacccaccttcactaacctggtggagacc
ctgggagacctgctgcaagcgagagttcagcaggatggaaaggattacattcctctggga
tctttcatgactggaaacactggtcgcagcgagtccttcaaagaaaacctgcttgcagtc
acaaacatgagttatatgaggggtatggccacacttcagacgtttgaggaactgcccttc
gaggagccagacagccctgacgatgagcagagtgacagtggcatgatcctcccatctgag
gagctaaagcgtctgatgtggaataaaggcaccaagaacaggaaactcagcaggttattt
acctttgctaactgcccggacaaccaggtgcctttcctgtgcaattacatcacaggtgtc
tctgatgacaagccgtctatcttgccgtgtgattgggggtctgacgagggtggctcccct
cctccggattacaactctgcttttctatatccctccctctaa
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