Etheostoma cragini (Arkansas darter): 117938446
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Entry
117938446 CDS
T07493
Symbol
trpc6b
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117938446 (trpc6b)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117938446 (trpc6b)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
DUF5455
RpoY
Motif
Other DBs
NCBI-GeneID:
117938446
NCBI-ProteinID:
XP_034718951
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Position
3:1491982..1502179
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AA seq
823 aa
AA seq
DB search
MMQQQQAVGKPRRQALRAAGYLYRAHPSSCLSLTEELFLEAAEYGNIPEVRRMLEELPDL
NVNCVNYMGQNALQLAVANEHFEVTKLLLRKKELSRIGDALLSAISKGYIRIVEAILSYP
AFADAQRLTNSPSQADKNDDFFAYDEDGTRFSHDITPIILASQCHEFEIVHILLVKGARV
ERPHDYFCQCRACSEQQRRDSFSHSQSRINAYKCLASPAYLSLSNEDPVMAALELSNELA
VLANIEKEFKNDYTKLSMQCKDFVVGLLDLCQNTEEVKAILNGDTESRQSPETVGRQNLI
RLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTTAVKLLLVLGVALGLPVLSLMY
WIAPSSKIGKLMCGPFLKFVAHAASFMIFLCLLVLNAADRFEGTSLLPNMTIHDHPSQLF
RMKTTTFTWMEILIISWVIGHKWKIWEECRDIWSQDIREYISEPWNLLDFSILTIFMTSF
IARLMAFWHAYSAQCYVDKHYTDLSNTTLPFEIQYFQLARINWMPSDPQLISEGLYAIAV
VLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFITVFVAFMVGMFTLYSHYLGAK
HNDAFTTLEESFKTLFWAIFGLSEVKSVVINIDHKFIENTGYVLYGVYNIIMVIVLLNML
IAMFNSSFQEIEDDADVEWKFARAKLWFSYFEHGGTLPVPFNLVPSPRAVVSLLLGIRRF
LLDVLKGKSKENANDEPELNKLRQQEDLSVEGSLCRHQDTMNRLIKRYILKAQRDKDNDE
IKEGELKEIKQDISSLRYELLERTNHDMETLAQLITQLGENHV
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcagcagcaggctgtaggcaaacccaggagacaagcgttacgggcagccggt
tacctgtaccgcgctcacccctcctcctgcctttccctgacagaggaactcttcttagaa
gctgcagaatatggcaacattccagaagtcaggcggatgcttgaggagctgccagacctt
aacgtcaactgtgtgaattatatgggccagaatgcactgcagctggcagttgccaatgag
cactttgaggtaactaagctccttcttaggaagaaagagctctctagaataggagatgca
ttgctttcagccatcagtaagggctacatccgtatagtggaggccatactgagctatccg
gcctttgcagatgctcagaggctgactaacagtcccagccaggcggacaaaaacgacgac
ttcttcgcctatgacgaggacggcacacgtttctctcacgacatcactcccatcatcctg
gcctctcagtgccatgagtttgaaatcgttcatatactgcttgtgaagggggcccgtgta
gagcggccccatgactacttctgccagtgcagggcctgcagcgagcagcagaggcgggac
tcattcagccattcacaatcccgcatcaatgcatacaaatgtctggccagtccagcgtat
ctgtccctgtccaatgaagacccagtgatggcggctctggagctgagcaatgagctggca
gttctggccaacattgagaaggagttcaagaatgattacacaaaactgtccatgcagtgt
aaagactttgtggtgggactcctggatctgtgtcaaaacacagaggaagtgaaggccatc
ttaaatggggacactgaatcccgtcaaagccctgagaccgtcggcagacaaaacctcatc
aggttaaaacttgcaataaaatatgaagttaaaaagtttgtggcacatccaaactgccaa
cagcaactcctctccatctggtatgagaacttgtctggactccgtcagcagaccacagca
gttaaactcctcctagtccttggtgttgctcttgggttgcctgtcctgtcccttatgtac
tggatagcaccgtcaagtaagatagggaaactcatgtgtggaccgttcctgaagtttgtg
gcccatgcagcatcctttatgatatttctatgcctgctggtcctgaacgcagcagaccgc
tttgagggaacgtcgctgctgccaaacatgaccatccacgatcacccctcacaactgttt
cgtatgaagactaccaccttcacctggatggagattctcatcatatcctgggtcataggt
cataagtggaagatctgggaagaatgtagagatatttggtcgcaggacatccgggaatac
atctcagaaccctggaaccttctggactttagtattttgaccattttcatgacttctttc
attgccagattaatggctttctggcatgcatattctgcccagtgttacgttgacaagcac
tacacggacctgtccaacacgaccttgccctttgagatacagtatttccagctggctcga
atcaactggatgccctcagacccgcagctcatttctgaaggcctgtatgcaatcgcagtc
gtgctgagtttctctcgcattgcatacatccttcctgccaacgagagcttcggccctttg
cagatctctctgggaagaacagttaaagacatctttaagttcatggtgattttcataact
gttttcgtggctttcatggtgggaatgttcactctgtactcgcactacctcggagccaag
cataacgacgccttcacaacactcgaagagagcttcaaaacgttattctgggccatcttc
ggcttgtcagaagtgaaatcagtggtcattaacatcgaccataagttcattgagaatact
ggctatgttctgtacggggtgtacaacatcatcatggtgattgtcctgctgaacatgctc
attgccatgttcaacagctccttccaagaaattgaggatgatgctgacgtggagtggaag
tttgccagagccaagctctggttctcgtactttgagcatggcggcacactgcctgtgccc
ttcaacctggtccccagccccagagctgtggtgtccctcttgctggggataaggagattt
ctcttggatgtccttaaaggcaaaagcaaagaaaatgcaaatgatgagccggagcttaac
aagttgaggcaacaggaagatctgagtgtggaaggatcgctttgtcgtcaccaagataca
atgaatcgcctcatcaagagatacatcttaaaagcacagagagataaagacaacgatgaa
ataaaggaaggtgaactgaaggagatcaaacaggacatctccagtctccgctacgagctg
ctggaaagaaccaaccacgacatggagaccctggcacagctcatcacgcaactgggagaa
aatcatgtttag
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