Etheostoma cragini (Arkansas darter): 117938675
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Entry
117938675 CDS
T07493
Symbol
cacna2d1a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04260
Cardiac muscle contraction
ecra04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117938675 (cacna2d1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
117938675 (cacna2d1a)
04261 Adrenergic signaling in cardiomyocytes
117938675 (cacna2d1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117938675 (cacna2d1a)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117938675 (cacna2d1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
117938675
NCBI-ProteinID:
XP_034719318
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Position
23:complement(6924122..7011005)
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AA seq
1084 aa
AA seq
DB search
MDYSVCLLLLLSTISSVSTGQFPTAQMIKEWVDQMQKELITLTDTSSGMENLIQIYQKHR
SHFSVESNNPRELVATAAGNIEKLLANRSQALKRLATEAEKFQMEHEWRDTSEVDKMVYY
NAKDDLNQTEDGKGRKNRYLPDDFEIDPDFKRLVSYNTTAVHIPTDIYEGSTIILNELNW
TEALEDTFRKNKEEDPSILWQVFGSATGLARYYPASPWIDSSNSANKIDLYDVRRRPWYI
QGAASPKDMLILVDASGSVSGLTLKLIRTSVNKMLETLSDDDYVNVVYFNDKATYASCFE
NLVQANVRNKRMLKDAVQSITAKGITNYRGGFELAFEQLAQMNVSRANCNKIIMLFTDGG
EERAEEIFEKYNPKQAVRIFTFSVGQHNYDKGPIQWMACANKGYYYEIPSIGAIRINTQE
YLDVLGRPMVKADRRAKQVQWTNVYLDALELGLVITGTLPVFNKTNTGSKKSQNQLILGV
MAIDVSLDDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPLTAKFHEPVTLDFLDAEL
ENEIKVQMRKKMIDGLTGNYTISTLVKSQDERYIDLGQRMYTFAPVKGTDYSLALVLPDY
SMHYIRANIADTITQAKWKDVSESLMADKFDEYGYTFIAPRMYCKDLKPPDKNKNNTEFL
IEFNNYIDTKTPNNPMCNVELVNRLLLDAGITSSLIKYWKGTELQHGVLARFVATDGGIT
RVYPKSAGIYWKEEAETYESSFYKRSLDNDLYIFTPTPYLSRENTSEDSLLVSRAVNLNI
DGIILKPAVVGVKLDISAWMASFINITQKLNCNDEICGCQLNDEYVDCVILDDGGFLVMS
NRDEYIDQIGRFFGGIDPILMVNLVNSSLFTSKKTFDYQSLCDPEKESKAAAGLRSVYVP
TIADILNLGWFATAAAWSILQQLLVSITFPNFLDAAEMDDEMSDAMLKEVCITEQTQYYF
ENNDLSFRGTIDCENCTRLYHAEKLPKTNLVFIIADAKLTCSSCDTKPLIQDEQQSNGPD
PCEMAQNPRYRKGPAVCFDNNEHDEAMCRRSAGSPLASSLLMLLLPLFMCCLGRRTLTVA
GRPV
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggattactcagtctgcttacttttactcctgtcaaccatttcgtctgtgtcgaccgga
caattccccacagcacagatgataaaggaatgggttgaccagatgcaaaaagagttgatc
acattaacagacacatccagtggtatggaaaacctgatacagatatatcagaaacacaga
tctcacttcagcgtggagtccaacaatccaagggaactggtggcaacagctgccgggaat
atagagaaactgctggctaaccgctcccaagcactaaagaggttggcaacagaagcagaa
aagtttcaaatggagcacgagtggagggacaccagtgaggttgacaaaatggtttactac
aatgccaaagatgaccttaatcagacagaggatggaaagggaaggaagaaccgatatctt
cctgatgattttgagatagaccccgacttcaaacgacttgtctcgtacaacaccactgcc
gtccacatccctacggacatatacgaaggctcaactatcattttgaatgagctaaattgg
acagaggccttggaggacactttccgaaaaaacaaagaggaagatccctccatcctctgg
caggtgtttggctctgccaccggattggctcgatactacccagcatctccttggatcgac
tcaagcaattcagccaataagatcgacctctatgatgtgcgcaggcgaccgtggtacatt
cagggggcagcgtcacccaaggacatgctgatcctggtagatgcgagcggcagtgtttcg
ggtctcaccctgaaactcatccgaacttctgtcaacaagatgctggagaccctttctgat
gatgactacgttaacgtggtctatttcaatgacaaggccacgtacgcatcatgctttgag
aacttggtgcaggccaacgtccgcaacaagaggatgctgaaagatgctgtgcagagcatc
acagccaagggtatcaccaactacagaggcggcttcgagctggcattcgagcagctcgca
cagatgaatgtgtcaagggccaactgtaacaagattatcatgctcttcactgacggagga
gaagagagggcagaggaaatctttgaaaaatacaacccaaagcaggcggtgcgcatcttt
acattttcagttggtcaacacaactacgacaaagggccaatccagtggatggcctgcgct
aataaagggtactactatgagattccatctataggtgccatcaggatcaacactcaggag
tatctggatgttttgggcaggcctatggtaaaggctgacagaagggccaagcaggttcag
tggaccaacgtctacctggacgcactggagcttggcctggtgatcactggaactctgcct
gtctttaacaagaccaacacaggctcaaagaaatctcagaaccagctcatcttgggagtt
atggccattgacgtctccctggatgatatcaagagactgacgcctcgctttacttttgga
ccaaatggctactactttgccattgatcccaatggatacgtgctgctccaccctaatctc
cagccactgactgccaagtttcatgaacctgttacgctggacttcctggatgcagagctg
gagaatgagatcaaagtgcagatgagaaaaaaaatgatcgacggtctaacagggaattac
acaatatctacattggtgaaatcccaggatgagcgctacattgacttaggccagaggatg
tacacctttgcaccagtgaaggggacagattacagcctggctctggtccttcctgactac
agtatgcattacatccgggccaacattgcagacacaatcacccaggcaaaatggaaagat
gtttctgaaagcctgatggcagacaagtttgatgaatatggatatacatttattgcaccg
aggatgtactgcaaggacttaaaaccacctgacaagaacaaaaacaacactgagtttctc
attgagttcaacaactacattgacacaaagactccaaacaaccccatgtgtaatgtggag
ctggtgaaccgattgctcctggatgctggcatcacctcatctttgatcaagtattggaaa
ggaacggagttgcagcatggtgtcttggccagatttgttgccaccgatggagggatcaca
cgggtctaccccaaaagtgctgggatctactggaaagaagaagcagagacatacgagtcc
agtttctataagagaagtttggacaatgatctgtacatcttcactccaacaccgtacctt
agtagagagaacacaagtgaagactcactccttgtgagcagagcagtaaatctcaacatt
gatggcatcatactcaaaccagcggtggttggcgtgaagttggacattagtgcctggatg
gcaagctttatcaacatcacacagaagctcaattgcaatgatgagatctgtggctgccag
ctaaacgatgagtatgtagactgtgtcattctggatgatgggggcttccttgtcatgtcc
aatcgagatgaatatattgatcagattgggcgtttctttggtggtatcgacccaatcctc
atggtgaacctggtcaactcgtccctgttcacctctaagaagaccttcgattaccagtcg
ctctgtgacccagagaaagagagcaaggctgccgcaggcctgcgatccgtctatgtgcct
acaatcgcagacattttgaatttaggatggttcgcaacagctgcagcctggtcaatactg
caacagttactggtcagcatcacattccccaatttcctggacgcagccgaaatggatgat
gaaatgtcagacgccatgctcaaagaggtctgcatcacagagcaaactcaatactacttt
gagaacaacgacctgtctttcagaggcacaatcgactgtgaaaactgcaccaggctctac
catgctgaaaagctgcccaagacgaacctggtctttatcattgctgatgcaaaactcacc
tgctcgtcctgtgacactaagccattaatacaggatgaacagcagtctaatggtcccgat
ccctgtgaaatggctcagaatccacgctatagaaaagggcccgcagtctgttttgataac
aatgaacacgatgaggccatgtgccgaaggagcgcaggctccccattggcttcctctctg
ctcatgttactgctgccactgttcatgtgctgtctcgggagaaggaccctgactgtggcg
gggcgtccggtctga
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