Etheostoma cragini (Arkansas darter): 117941305
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Entry
117941305 CDS
T07493
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117941305 (scn4ab)
Ion channels [BR:
ecra04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117941305 (scn4ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
117941305
NCBI-ProteinID:
XP_034722262
LinkDB
All DBs
Position
Unknown
AA seq
1740 aa
AA seq
DB search
MALVLPPVGSEIFRRFTPSSLEEIQKRQEVEEKERQRRKEKNIEIAEEDLPKPASDLEAG
KPLPFIYGDPPPELFNTPLEELDPFYQSQKTFIVIGKGNIIYRFNAEPACYLLSPFSQLR
TIAIKILIHSLFSLFIMLTIITNCAFMTMSHPPAWSKAVEYIFTFIYTFEATIKVVSRGF
CVGGFTFLKDPWNWLDFMVISMAYLTEFIDLGNVSVLRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLCVFALIGLQLFMGNLRQKCVLMPPQLLSNHTSDIGLNTTY
HGNDTHSNRTGSDDFDYNEFINNPKNFYFLPGQLDALLCGNSSDAGVCPDGYVCLKAGRN
PNYGYTSYDSFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINL
ILAVVAMAYAEQNEANMAEAKQKEEEYAQILELLKKRQEEQAACRAEDSSGDAVQHEQEH
TAMEEFADDQRPCPPCWYAFADIFLKWNCCSCWRWLKSWLYTIVMDPFVDLGITICIVLN
TVFMAMEHYPMTEDFQELLSIGNLVFTVIFTAEMVFKLLAMDPYYYFQVGWNVFDSIIVT
MSLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLNMLIRIIGRSVGALGNLTLVLAIIV
FIFAVVGMQLFGKNYKDCVCRISLDCTLPRWHMFDFFHAFLIIFRVLCGEWIETMWDCME
VSGQTMCLIVFMMVMVIGNMVVLNLFLALLLSSFSGDNLAAPEEEGENNLQIAINRINMA
VAWTKTQILQQVLTLRGKNKDLDPEHTAVRGGEVDGTTKDCLVLTSGSEVKTLNCNHGNS
LKLGCLKVPIAEAESDFETPDIDEEEEEDEVDKDNEEKLSKGDGSSVCSTVQRVPEIQED
DGDEDDPNTPVDCYSDEWYRRCPFLDVDTSQGGGKVWSNIRRTCFCVVEHNYFESFIIFM
ILMSSGALAFEDIYLEQRRVIKTVLEYADQVFTYVFVVEMVLKWVAYGFKTYFTNAWCWL
DFLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSI
FNVLLVCLIFWLIFSIMGVNLFAGKFYHCFNETSEELFPPEIVNNRTECLALVQGNAGGV
RWRNVKVNYDNVGMGYLALLQVATFKGWMDIMYAAVDSRDVESQPMYEANLYMYIYFVIF
IIFGSFFTLNLFIGVIIDNFNQQKSKLGGKDIFMTEEQKKYYNAMKKLGSKKPQKPVPRP
ENKFQALVFDLVTTQVFDIFIMVLICLNMVTMMVETDEQSEEKVLILYWINLVFIVIFTG
ECTLKMTALRQHYFSVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRV
LRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVRKEAMIDDMFN
FETFGNSMICLFMITTSAGWDGLLSPIMNTPPDCDPDLENPGSTVQGNCGSPGIGIVFFT
TYIIMSFLVVVNMYIAIILENFNVATEESGDPLCEDDFEMFYETWEKFDPDASQFIQYSK
LSDFCDTLKDPLRIPKPNTVRLIHMDLPLVPGDKIHCLDILLALTAQVLGDAGGMDALKA
SMEEKFMANNPSKVSYEPISSTLRRKQEDVAASVIQKAYRKHLLQRTLKLASHKYRAKTD
GRGEAPPETQGLLCQRISRLYGEEPRPGPVELQREFVLHAVPPLNATNGLPDESLRESVV
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgtactaccccctgttggttcagagatcttcagacgattcacaccatcctcg
ctggaggaaatacaaaaacgacaggaagtggaggagaaggagcgccagaggaggaaggag
aagaacattgagattgcagaggaagatcttcctaaaccagccagcgatctcgaggctggg
aagcccctgccattcatctatggagacccgccccctgagctgtttaacaccccattggag
gagctggatcccttctaccaatcacagaagacattcatcgtgattggtaaaggtaacata
atctaccgttttaacgccgagccagcctgttaccttctgagtccgttcagtcagctacgg
accatcgctatcaagatcctcatccactctttattcagtttgttcattatgttgacgatc
atcaccaactgtgcgtttatgactatgagtcatcctccagcgtggagcaaagccgttgag
tacatctttacattcatttacacgtttgaagcaacaatcaaagtggtgtcgcgaggattc
tgtgttggaggcttcaccttcctcaaagacccgtggaactggctggactttatggtcatc
agcatggcatacctgaccgagttcatcgatctgggaaatgtttctgtgctgaggacgttc
agagtccttcgagctctgaagaccatcacagtcatccctggtctgaagacaattgtcgga
gctctgatccaatcagtgaagaagctagctgatgtcatgattctgaccgtgttctgcctc
tgcgtcttcgctttgattggcctgcagctcttcatgggaaacctgcggcaaaaatgtgtc
ttgatgccgccacagttgcttagcaaccacacgtctgacattggtcttaacaccacttac
catggcaatgacacccacagcaacaggacaggaagcgatgactttgattacaacgagttc
atcaacaacccaaagaacttctacttcctgccgggtcaactcgatgctctgctatgtggg
aacagttcggacgccggggtctgtccagatggatacgtctgtctgaaagcagggagaaac
cctaactacggctacaccagctacgactcatttgggtgggccttcctggctctgttcaga
ctgatgacccaggacttctgggaaaacctcttccagctgacgctgcgagcagcaggtaaa
acctacatgatcttctttgtggtcattatcttcctcggctcgttctacctcattaacctg
atcctggccgtggttgccatggcgtacgccgagcagaacgaggccaacatggccgaggcc
aaacagaaggaggaagagtacgctcagatcctggagctgctgaagaagagacaggaggag
caggcggcctgcagggcggaggattcatctggagacgcagtccaacatgagcaagaacat
actgccatggaagagttcgctgatgaccagaggccgtgccctccgtgttggtacgccttt
gctgacatcttcctcaagtggaactgctgcagctgttggcggtggctcaaatcgtggctc
tacaccatcgtcatggacccgtttgtggaccttggcatcaccatctgcatcgtcctcaac
accgtctttatggccatggagcactatccaatgaccgaggacttccaggagcttctcagc
attggaaatctggtgtttacagtgatcttcacagctgagatggtcttcaaacttctggcc
atggacccgtattactacttccaggtgggctggaacgtcttcgacagcatcattgtcacc
atgagtctagtggagctcggactggcgaacgtcgaggggctgtcggtgctgcgctccttc
agactgatgcgagtgtttaagctggccaagtcctggccgaccctgaacatgctgatcagg
atcattgggcggtctgtgggggctctggggaacctgaccctggtgcttgccatcatcgtc
ttcatcttcgccgtggtcggcatgcagctgtttggaaagaactacaaagactgcgtgtgc
cgaatctcacttgactgcactctcccccgctggcacatgttcgacttcttccacgccttc
ctcataattttccgagtgctgtgtggggagtggattgagaccatgtgggactgcatggag
gtatcgggccagaccatgtgtctgatcgtcttcatgatggtcatggtgattgggaacatg
gtggtcttgaatctgttcctggcgttgttgctgagctcatttagtggagataatcttgca
gctccagaagaagaaggagaaaacaacttgcagattgccataaaccggatcaacatggcc
gtggcttggaccaagacccagatcctccaacaagtcttgacgttaaggggaaagaataag
gacctggacccagaacacaccgcggtccgcgggggggaagtcgacgggacaacgaaggat
tgtttggttttgacctctgggtcagaggttaagaccctcaactgtaaccatggcaatagc
ctcaaacttggctgcctgaaggtccccatcgctgaggccgagtcggactttgagacgcct
gacatcgatgaagaagaagaagaggacgaagtggacaaagacaatgaagaaaaactctct
aaaggtgacggctcgtcggtctgcagcactgtccagagagttccagaaatccaggaggac
gacggcgatgaagatgatccaaacacacctgtggactgctatagtgacgagtggtaccgc
cgctgtccgttcctggacgtggacacgtcccagggtggagggaaggtctggtctaacatc
aggagaacttgcttctgcgttgtggaacacaactactttgagagcttcatcattttcatg
atcctgatgagcagtggagctctggcatttgaggacatctaccttgagcagcgccgcgtc
ataaagacagttctggagtacgcagaccaggtgttcacctacgtgttcgttgtggagatg
gttctgaagtgggtcgcctacgggttcaagacgtacttcaccaacgcctggtgctggctt
gacttcctcatcgtagatgtgtctctggtgtcactgacagcaaacatcctggggtactct
gagctgggagccatcaagtctctgaggacactgagagctctgaggcccctgagggccctg
tctcgctttgagggaatgagggtggtggtgaatgcgctggtaggggccatcccatccatc
ttcaacgtgttgctggtgtgtctgatcttctggctgatcttcagcatcatgggtgtcaat
ctgttcgctgggaagttttatcactgcttcaacgagacgtcggaggagctgttcccccct
gagatcgtcaacaaccggaccgagtgtctggccctggtccaggggaatgccgggggggtc
cgctggaggaacgtcaaggtcaactacgacaacgtggggatgggctacctggcgctgctg
caggtggccacgtttaaaggctggatggacatcatgtacgcagcggtggactccagagac
gtggagtcacagccaatgtatgaggccaatctctacatgtacatttactttgtcatcttc
atcatcttcggctccttcttcactcttaacctcttcatcggagtcatcatcgacaacttc
aaccagcagaaatcaaagttgggaggaaaagatatcttcatgacagaggagcagaagaaa
tattacaacgcaatgaagaagctcggctccaagaaacctcagaaacctgttccacgacct
gagaataagttccaggccctggtgtttgacctggtgacaacgcaggtgttcgatatcttc
atcatggtgttgatctgtctcaacatggtgacgatgatggtggaaacagacgagcagagt
gaggaaaaggtcctgatcctgtactggatcaacctggtcttcatcgtcatcttcaccgga
gagtgcacgcttaagatgacggcgcttcgtcagcactacttctccgtgggctggaatatc
ttcgacttcgtggtcgtcatcctgtccatcgtaggactcctcctcgctgacatcatagag
aagtattttgtctcgcccacgctcttccgtgtgatccgattggctcgtattggccgtgta
cttcgtctcattcgtggagccaaggggatccggacactgctgtttgcactgatgatgtca
cttcctgcgctcttcaacatcggcctgctactcttcctcatcatgtttatcttctccatc
ttcggcatgtccaacttcgcctacgtgcgtaaggaggcgatgatcgacgacatgttcaac
ttcgagacgtttgggaacagcatgatctgtctgttcatgatcaccacgtcggccggctgg
gacgggctgctgagccccatcatgaacacgccgccggactgcgaccccgacctcgagaac
ccgggctccacggtgcagggcaactgtggcagcccggggattggcattgtcttcttcacc
acctatatcatcatgtccttcctcgtggtggtcaacatgtacatcgccatcatcctggag
aacttcaacgtagcgacggaggagagcggcgacccgctgtgcgaggacgacttcgagatg
ttttatgaaacttgggagaagttcgacccggatgcttcccagttcatccagtacagtaaa
ctgtcagatttttgcgacaccctgaaggatcctctgaggattcccaaaccaaatacagtc
agactgatccacatggatctgccgctggttcctggagacaaaatccactgtctggacatc
ctgctggctctcactgcccaggtgttaggtgatgcgggaggaatggatgctcttaaagca
agcatggaggagaagttcatggccaacaacccctccaaggtgtcctatgaaccaatcagc
agcactttgcggaggaaacaggaagatgtggcggcgtcagtgatccaaaaagcgtacaga
aaacacctgctgcagcggacgcttaaactggcatcccacaaataccgagcaaagacggac
ggccgcggagaggcgccgcccgagacccaaggactgctctgccagcgaatcagccgcctg
tacggagaggagccgcgacccggccctgtggagcttcagagagagtttgtcctccacgct
gttcctcctctcaacgccaccaacggcctcccagatgagagcctgagggagtcagtcgtc
tga
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