Etheostoma cragini (Arkansas darter): 117941776
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Entry
117941776 CDS
T07493
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
117941776 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117941776 (mmp2)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
117941776 (mmp2)
Peptidases and inhibitors [BR:
ecra01002
]
Metallo peptidases
Family M10
117941776 (mmp2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
117941776
NCBI-ProteinID:
XP_034722817
LinkDB
All DBs
Position
1:complement(27453592..27468395)
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AA seq
658 aa
AA seq
DB search
MGFPTIFSCRRIVLKVFLVQFIAFQNTYAAPSPIIRFPGDDTTPKTDKEVALHYLNKFYG
CPKDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVDIMKKPRCGVPDVANYNFFHRKPMW
QKKDITYRILGYSPDLDEEVINDAFFRAFKVWSDVSPLTFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGDGQVVKVKYGNADGEFCKFPFLF
MGTEYNSCTAQGRDDGFLWCSTTYNFAEDGKYGFCPHELLFTIAGNADGAACKFPFTFLG
EKYDACTTQGRDDGYRWCATTENYDQDKKFGFCPETAMSTVGGNAEGSPCVFPFTFLGDT
YDSCTSSGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPIYTYTKDFRLPDDDIKGIQELYGVPTDKPLPPTQGPVTPMDICKEPIVFDAVAQIR
GETFFFKDRFLFRSVNFRSKPNGPMLVATYWPDLPAKIDAAYENPVEEKTVFFSGNEMWV
YKADELERGYPKRISSLELPTDLQQIDAVFNFRKNRKTYLFAGDKFWRYDEDKKKMDLGF
PKLIADSWNGIPDGMDAAFSLNGIDYSYFFKDNHYFKLEDSSLKIVKLGEITKDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgacgatatttagttgtcgccggattgttctcaaggtgtttttggttcag
ttcatcgcctttcaaaatacatatgctgctccttcgcctataatcagatttcctggagac
gatactactcccaaaacagacaaagaggttgctttgcactatctgaataagttttatgga
tgcccaaaagacagatgtaacctaatggtgctaaaggacaccctgaagaaaatgcaaaag
ttcttctctctgcaagaaactggagagattgatgccaaaactgtggatatcatgaaaaag
ccccgctgtggcgtcccagatgtggccaactacaatttcttccacaggaaacccatgtgg
cagaagaaagacataacttacagaatccttggatacagtcctgacctggatgaggaagtc
ataaatgacgcgttcttcagagccttcaaagtatggagtgacgtctccccactcacgttt
actcgtctcatggacggagaggccgacatcatgattaattttggccgaaatgagcacgga
gatggttacccctttgatggcaaagatggcctcttggctcatgccttcgctccagggccg
ggaattgggggagactcccactttgatgatgatgagcaatggacactgggagatggccaa
gtggtaaaggtaaaatatggcaatgctgatggggagttctgtaaattccccttcctgttc
atgggcactgagtacaacagctgcacagctcagggccgtgatgatggcttcctgtggtgc
tcaaccacatacaattttgctgaagatggcaaatatggattttgcccccatgaattacta
ttcaccatcgctggaaacgcagatggcgctgcatgtaaattccctttcacctttctggga
gagaagtatgacgcatgcaccactcaaggcagggatgatgggtaccgctggtgtgccacc
actgagaactatgaccaggacaaaaaatttgggttctgccctgaaactgccatgtccacg
gtgggcggaaacgcagagggaagcccctgtgtcttccccttcacctttttgggtgacacc
tacgactcctgtacctcatctggacgcagcgatggtaaaatgtggtgcgcttccaccaag
agttatgatgacgaccgcaaatggggattctgtccagaccaaggctacagtttgttcctg
gtggcagcccatgagtttggtcatgcccttggcttggagcactctcaggaccccggagca
ttgatggcccctatttacacttacaccaaagacttcagactccctgatgatgacattaaa
ggcatccaagagctctacggagtgccaacagacaagccgttgcctccaacccagggtcca
gtcactccaatggacatctgtaaagagccaattgtctttgatgctgtagcacagatcaga
ggagagaccttcttcttcaaggacaggttcctgtttaggtcagtaaacttcagaagcaag
cccaacggccctatgctggtggccacttactggccagacctgcctgccaagatagatgct
gcctatgaaaacccagtggaggaaaaaacagtgttcttctcaggcaacgagatgtgggtc
tacaaagccgatgagctggagagaggctatcccaagaggatttcaagtcttgaactcccc
accgacctgcagcaaattgacgctgtcttcaactttaggaagaacaggaagacttacctg
tttgctggggacaaattctggagatacgatgaagataagaagaaaatggatcttggcttt
cccaaacttattgctgactcttggaatggaatccccgatggcatggacgctgccttcagt
cttaatggcattgattacagttacttcttcaaagacaaccactatttcaaactggaagac
agcagcttgaagattgtcaaattgggtgaaatcacaaaggactggctcggttgttga
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