Etheostoma cragini (Arkansas darter): 117943654
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Entry
117943654 CDS
T07493
Name
(RefSeq) rano class II histocompatibility antigen, B alpha chain-like
KO
K06752
MHC class II antigen
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04145
Phagosome
ecra04514
Cell adhesion molecules
ecra04672
Intestinal immune network for IgA production
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117943654
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117943654
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117943654
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117943654
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117943654
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117943654
Exosomal proteins of epithelial cells
117943654
Exosomal proteins of breast milk
117943654
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Gene cluster
GFIT
Motif
Pfam:
C1-set
C2-set_2
Ig_3
Ig_2
MHC_II_alpha
Motif
Other DBs
NCBI-GeneID:
117943654
NCBI-ProteinID:
XP_034725815
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All DBs
Position
4:complement(1793561..1796678)
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AA seq
239 aa
AA seq
DB search
MSLTAITLIVFTGAISAPAAKSIHDFHYIYGCYEHGEVRVDVVVDDDVAAYADFTKDEVV
IAIPHLPQSVPDLKKRAYSLAKASIAHCHSVLGKARKADPGVPIRQDAPDISMYTRYEGE
DGVVNTLFCLANHFYPPSVNFTWTKNGVEVTEGVSDLRYRHNSDGTFHRISSLSFTPREG
DVHSCRVEHRALHRPLARTWELTERRSRVSPAAAFFGGSLVLCLMGVAAGVFFFIKKPN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgactgcgatcacactgatcgtgttcactggagctatttctgctcccgcagca
aaatccatccatgacttccactacatctacgggtgctatgaacacggcgaggtacgggtg
gacgtcgtcgttgacgatgacgtggccgcgtatgctgacttcaccaaggatgaagtggtg
attgccatacctcacctgccccagtctgttccagatttaaagaaaagggcttattcgtta
gccaaagctagcattgctcactgtcacagtgttttgggtaaagcgaggaaagcggatcct
ggtgttcccattcgccaagacgctccggacatctccatgtacacccggtacgagggggag
gacggcgtggtgaacaccctcttctgtttggccaatcacttctaccccccctccgtcaac
ttcacatggacaaagaatggggtggaggtcacggaaggggtttccgacctgcggtaccgc
cacaacagcgacgggacgttccacagaatttcatcactgagttttacgccccgggagggg
gacgttcactcctgtcgggtggagcatcgggccttacaccggcccctcgccaggacctgg
gagctgacggagaggcggagcagagtgagtcctgcagctgccttcttcggagggagtcta
gtcttgtgcctgatgggagtcgccgccggagtcttcttcttcatcaagaagccaaattag
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integrated database retrieval system