KEGG   Etheostoma cragini (Arkansas darter): 117943654
Entry
117943654         CDS       T07493                                 
Name
(RefSeq) rano class II histocompatibility antigen, B alpha chain-like
  KO
K06752  MHC class II antigen
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04145  Phagosome
ecra04514  Cell adhesion molecules
ecra04672  Intestinal immune network for IgA production
ecra05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117943654
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117943654
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117943654
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117943654
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecra04147]
    117943654
Exosome [BR:ecra04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117943654
  Exosomal proteins of epithelial cells
   117943654
  Exosomal proteins of breast milk
   117943654
SSDB
Motif
Pfam: C1-set C2-set_2 Ig_3 Ig_2 MHC_II_alpha
Other DBs
NCBI-GeneID: 117943654
NCBI-ProteinID: XP_034725815
LinkDB
Position
4:complement(1793561..1796678)
AA seq 239 aa
MSLTAITLIVFTGAISAPAAKSIHDFHYIYGCYEHGEVRVDVVVDDDVAAYADFTKDEVV
IAIPHLPQSVPDLKKRAYSLAKASIAHCHSVLGKARKADPGVPIRQDAPDISMYTRYEGE
DGVVNTLFCLANHFYPPSVNFTWTKNGVEVTEGVSDLRYRHNSDGTFHRISSLSFTPREG
DVHSCRVEHRALHRPLARTWELTERRSRVSPAAAFFGGSLVLCLMGVAAGVFFFIKKPN
NT seq 720 nt   +upstreamnt  +downstreamnt
atgagtctgactgcgatcacactgatcgtgttcactggagctatttctgctcccgcagca
aaatccatccatgacttccactacatctacgggtgctatgaacacggcgaggtacgggtg
gacgtcgtcgttgacgatgacgtggccgcgtatgctgacttcaccaaggatgaagtggtg
attgccatacctcacctgccccagtctgttccagatttaaagaaaagggcttattcgtta
gccaaagctagcattgctcactgtcacagtgttttgggtaaagcgaggaaagcggatcct
ggtgttcccattcgccaagacgctccggacatctccatgtacacccggtacgagggggag
gacggcgtggtgaacaccctcttctgtttggccaatcacttctaccccccctccgtcaac
ttcacatggacaaagaatggggtggaggtcacggaaggggtttccgacctgcggtaccgc
cacaacagcgacgggacgttccacagaatttcatcactgagttttacgccccgggagggg
gacgttcactcctgtcgggtggagcatcgggccttacaccggcccctcgccaggacctgg
gagctgacggagaggcggagcagagtgagtcctgcagctgccttcttcggagggagtcta
gtcttgtgcctgatgggagtcgccgccggagtcttcttcttcatcaagaagccaaattag

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