Etheostoma cragini (Arkansas darter): 117943664
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Entry
117943664 CDS
T07493
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117943664 (pkp1b)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117943664 (pkp1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
Ish1
Motif
Other DBs
NCBI-GeneID:
117943664
NCBI-ProteinID:
XP_034725817
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All DBs
Position
4:21899116..21912121
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AA seq
730 aa
AA seq
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MTSLDPLKSVISIGNVDDTSLALPSGNQFRSGQQRVLEQVQIIRRTKSRRSSSSRSGSTS
LSPTTPTCDSVFIDAPNSPTSKVSGTLYFGNSKTLSVEKNNRQLVNNIQGSGVKRNTRAS
TYQYERCYAPVGSMAVCQTYTSRSEPGGARQLSMPKKHVPLQRLVSNRGTYRTERGTSQF
ITNTTSQPHLQPLHIMNGTSQTKSDSQIVYSKGDVTKTLSKPPVTQGAPNSKGDSGSNDN
SGVADITMKEAVHFLSNDDETYQHCGASYIQHNTFIGDKAKEEVLKLNGIHPLVNLLRSS
SLQVNQTALAALRNLSFKSQNNKEEIYRSGGITEAVALLRETDSVEIQKQLTGLLWNLSS
VDSLKPDLLKSALPVLIERVIVPYTTGPKQTSSNSQDPEVFFNATGCLRNLSSTKQSNRQ
TMRKCRGLVDSLVSYVKDCVDAGNPDDKSVENCVCILHNLTFQLEAEAPALFSRITALAK
TVNKDHIQGDTGRIGCFSPQSKTSEHERHFDFPVVEDPQPNGAGWLIHSQTLQTYLSLLG
TSQREETQEACCGALQNLTTYEGIVSSVMSQTIVQKLNGLQVICPLLKSNKVTMQKNTVA
LVGNLAKNPNLHNAIARKALPELLGILSAGTKGGNESDDTLAMACRTSNCLFMKEPEMGK
HHLNNKLINSLKDLSLNGYFPKSSKAAALLLYNLWSDKDLQSFLKKQGMSKSSFVNDITT
AAHKSVQVVD
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtctggatccgctgaaatcggttatttccatcgggaatgtggacgacacgtct
ctggctctgccgtccggtaaccagtttcgatcagggcaacagcgcgtcctggaacaagtc
cagattatccggaggaccaagtccaggaggtccagcagcagcaggagtggatctacttct
ttatctccaacaacccccacgtgtgactccgtgttcatagatgctccaaactcaccgacc
agcaaagttagtggaaccctctactttgggaattctaaaactctcagcgtagagaaaaac
aatcggcaactagtgaacaacatacagggatccggagtgaagaggaacacaagagcttct
acctatcaatatgagaggtgttacgccccggtcggatccatggccgtctgtcagacctac
accagccgtagcgagcctggtggagcccggcagctctccatgccaaaaaaacacgttcct
ctgcagagacttgtttccaacaggggcacctacaggacagagaggggcaccagtcagttt
ataacaaacaccacgtcccagcctcatcttcagcctttgcacattatgaatggcacaagt
cagaccaagtcagacagccagatcgtgtacagcaaaggtgacgtgaccaaaacactctcg
aagcctcccgttacccagggtgctccaaatagcaaaggagattctgggtcaaatgataac
agtggagttgctgacatcactatgaaggaggctgtgcattttctttccaacgatgatgag
acatatcagcactgcggcgcttcctacatacagcacaacactttcatcggcgacaaggct
aaagaggaggttttgaagctgaacgggatccatcccttggtgaatctgctacgcagctcc
agtttacaagtcaaccagacagccttggctgccctccgtaacctgtcctttaaaagccaa
aataacaaggaggagatatatcgctcggggggcatcacagaggccgtggctctgctcaga
gagacagactctgtagagatacagaaacaactaacaggtctcttgtggaatctgtcctct
gtagacagcctgaagccagacctgctaaagagtgctctgccagtccttatcgagcgtgtg
attgtgccttacacaaccggtcctaagcagaccagcagtaacagccaagaccctgaggtc
ttcttcaacgccaccggatgtctaagaaaccttagcagtacaaagcaaagcaacagacag
acgatgagaaagtgtcgcggtttggttgactctttggtcagctatgtgaaagactgcgtg
gatgcaggaaacccagatgataagtctgtagaaaactgcgtgtgtatcctacacaacctg
acgttccagctggaggccgaggctccggccctattcagcaggatcacagcgttggccaag
actgtcaacaaggaccacattcagggggacaccggccgtatcggctgcttcagtccccaa
agcaaaacatcagaacacgagcgccactttgacttcccggtcgttgaggatccacaacct
aacggggccggttggctgatccactcccaaaccctgcagacttacctttctttgcttggc
accagccagcgagaagaaacacaggaagcctgttgtggagccctgcagaacctcaccaca
tatgaaggcattgtctccagtgtgatgagccagaccattgtgcaaaaactgaatggcttg
caagttatctgtcctcttttaaaatctaataaagttaccatgcagaagaacacagtggct
ttggtgggaaacctggccaagaacccaaacctgcacaatgccatagctcgtaaagccctc
ccagagctgctaggcatcctcagcgcaggcactaagggaggaaatgagtctgatgacaca
ctggccatggcttgtcggacctccaactgcctgttcatgaaggaacctgagatgggcaag
caccatttaaacaacaagctgattaactcactgaaagatctaagcctaaacggatatttc
ccaaaatccagcaaagctgcagccctgcttctctataacctgtggtcagacaaagattta
caaagcttcctaaaaaagcaaggaatgagcaagtcctcttttgtgaacgacatcaccacg
gcagcacacaagtcggttcaagttgttgattaa
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