KEGG   Etheostoma cragini (Arkansas darter): 117945682
Entry
117945682         CDS       T07493                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04145  Phagosome
ecra04514  Cell adhesion molecules
ecra04672  Intestinal immune network for IgA production
ecra05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117945682
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117945682
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    117945682
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117945682
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecra04147]
    117945682
Exosome [BR:ecra04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117945682
  Exosomal proteins of epithelial cells
   117945682
  Exosomal proteins of breast milk
   117945682
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 117945682
NCBI-ProteinID: XP_034729210
LinkDB
Position
6:24334491..24338695
AA seq 265 aa
MGLYFLLKLTVSAVLLCSTPAGGYVYQMIYDCEYGDNITDMVFFVKNLFNQKMNTLYDSR
VGKYVGFGEYGMINAAHYNSQQWKMVERKAQVETLCRYNARLFRRSTLDRKVPPVVKVHE
TEPADYGKRSMLECSVMGFFPQEVRLTWLRDGLEVNTDVSSTDVLANGDWSFQLHSYLEF
TPRRGERVTCRVEHSSLRESLEVDWDTFSLDAKHLKMAMGIIFFFIGFTAATGGAAYYWW
KQRFDFSPSGRQAQTPCDPSELLSF
NT seq 798 nt   +upstreamnt  +downstreamnt
atgggactttattttctgctcaaactcacagtctctgctgttttactctgcagtacacca
gcaggtggctatgtatatcagatgatatatgactgtgagtatggtgacaacatcaccgac
atggtcttctttgtaaagaacctatttaaccagaagatgaacaccctgtatgactctcgg
gttgggaagtatgttggctttggagaatatggaatgatcaacgctgcccattataacagc
cagcagtggaaaatggttgaaagaaaagctcaagtggagactctttgcagatacaacgca
agattattcagaaggagcacactggatcgtaaagtgcctccagttgtcaaggtccatgag
accgagccagctgactacgggaagcggtccatgcttgagtgcagcgttatggggttcttc
cctcaggaagtgaggctgacctggctgagagacggcctagaggtcaacactgatgtgtcg
tctacagatgtcttggccaatggggactggagcttccagctgcactcttacctggagttc
acacccagaagaggggagcgggtgacctgcagggtggagcacagcagcctcagagagagc
ctggaggtggactgggacaccttttcactcgatgctaaacacctgaagatggccatgggg
atcatcttcttcttcattggcttcactgcagctactggtggagcagcttactactggtgg
aaacagaggtttgacttcagcccatcaggcagacaagcacagactccatgtgatccctca
gaattgttgagtttttaa

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