Etheostoma cragini (Arkansas darter): 117946023
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Entry
117946023 CDS
T07493
Symbol
si:dkey-199f5.8
Name
(RefSeq) beta-1,4-galactosyltransferase 3
KO
K07968
beta-1,4-galactosyltransferase 3 [EC:
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00510
N-Glycan biosynthesis
ecra00513
Various types of N-glycan biosynthesis
ecra00514
Other types of O-glycan biosynthesis
ecra00515
Mannose type O-glycan biosynthesis
ecra00533
Glycosaminoglycan biosynthesis - keratan sulfate
ecra00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ecra01100
Metabolic pathways
Module
ecra_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ecra_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
117946023 (si:dkey-199f5.8)
00513 Various types of N-glycan biosynthesis
117946023 (si:dkey-199f5.8)
00515 Mannose type O-glycan biosynthesis
117946023 (si:dkey-199f5.8)
00514 Other types of O-glycan biosynthesis
117946023 (si:dkey-199f5.8)
00533 Glycosaminoglycan biosynthesis - keratan sulfate
117946023 (si:dkey-199f5.8)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
117946023 (si:dkey-199f5.8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecra01003
]
117946023 (si:dkey-199f5.8)
Enzymes [BR:
ecra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
117946023 (si:dkey-199f5.8)
2.4.1.90 N-acetyllactosamine synthase
117946023 (si:dkey-199f5.8)
Glycosyltransferases [BR:
ecra01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
117946023 (si:dkey-199f5.8)
Glycolipid
117946023 (si:dkey-199f5.8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
117946023
NCBI-ProteinID:
XP_034729701
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Position
6:complement(23085616..23103648)
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AA seq
405 aa
AA seq
DB search
MVSIQSKWRYLFMFLGIQLVVMALLSREGYQKRVSYFIRIFRKSDSTGMTGRNHTAAGIA
GGDVYANLSHLSRSHSHGDGIPYCPKTSPLIGGPIHVSFPSGLTLAEVQRKNPMVVRGGR
YRPPDCEARHRTAIIIPHRNREHHLKFLLYYLHPFLQRQQLNYGIYVIHQAGNYTFNRAK
LMNVGFREAMKEEDWDCLFFHDVDLIPEDDRNTYICDSNPKHAAIAMDKFGYKLPYKMYF
GGVSALTPLHYLKMNGFPNNYWGWGGEDDDIGVRVTLGGMYITRPSLKVGRYKMIKHKLD
KGNDVNPKRFNMLAKTRQTWKFDGMNTAEYETISRQYMPLYTNITVNIGTEAGLHPPPPP
PTPHAKVAGKLAVKAPAEVPAKGSAKPPAKLKEGDSEKKSTLRDR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtatccagtccaaatggcgctacctgttcatgttcctgggcatccaactggtg
gtcatggcattactgtcccgagagggataccagaagagggtttcctacttcatccgcata
ttccgcaagtctgactccactggtatgacaggccgcaaccacacagcagcaggcatcgct
ggaggggatgtatatgccaacctctcccacctatccagatctcatagccatggagatggc
ataccttactgcccgaagacgtcccctcttataggtgggccgatacacgtcagcttccca
tcagggctcactctagcagaggttcagaggaaaaatccaatggtggtgcgcggaggacgc
tacaggccgcctgactgtgaggcgaggcaccgaacagccatcatcattccccacagaaac
cgagaacaccaccttaagttcttactatactacttgcatccttttctgcagcgacagcag
ctcaactatggaatttacgtcattcaccaggcgggaaactacactttcaacagggccaag
ctgatgaatgtgggtttccgggaggccatgaaggaggaagactgggactgtctcttcttc
cacgatgtggacctcattccagaggacgaccgcaacacatacatctgcgattccaacccc
aagcacgcagccatcgccatggacaagtttggctacaagcttccgtacaagatgtacttt
ggaggagtgtcagctctgacgccactgcactacctcaagatgaacggctttcccaacaac
tactggggctgggggggcgaggacgacgatattggagtcagagtgactctgggggggatg
tatatcactcgtccatccctgaaggtcggccgttacaagatgattaaacataagttggac
aaaggcaatgacgtgaacccaaaaaggttcaatatgctggccaagacgcgtcagacctgg
aagtttgatgggatgaacacagctgaatatgagacaatctcacggcaatacatgcccctc
tacaccaacatcactgtcaacattggcactgaggccggcctacatccaccgccacctcca
ccaacaccacatgccaaagttgcaggaaaacttgcagtcaaagcacctgccgaagtccca
gcaaaaggctcagccaaaccccctgccaaactcaaagagggcgactcagagaaaaagtct
accctaagagaccgttaa
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