KEGG   Etheostoma cragini (Arkansas darter): 117946023
Entry
117946023         CDS       T07493                                 
Symbol
si:dkey-199f5.8
Name
(RefSeq) beta-1,4-galactosyltransferase 3
  KO
K07968  beta-1,4-galactosyltransferase 3 [EC:2.4.1.90 2.4.1.38 2.4.1.-]
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra00510  N-Glycan biosynthesis
ecra00513  Various types of N-glycan biosynthesis
ecra00514  Other types of O-glycan biosynthesis
ecra00515  Mannose type O-glycan biosynthesis
ecra00533  Glycosaminoglycan biosynthesis - keratan sulfate
ecra00601  Glycosphingolipid biosynthesis - lacto and neolacto series
ecra01100  Metabolic pathways
Module
ecra_M00071  Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
ecra_M00075  N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    117946023 (si:dkey-199f5.8)
   00513 Various types of N-glycan biosynthesis
    117946023 (si:dkey-199f5.8)
   00515 Mannose type O-glycan biosynthesis
    117946023 (si:dkey-199f5.8)
   00514 Other types of O-glycan biosynthesis
    117946023 (si:dkey-199f5.8)
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    117946023 (si:dkey-199f5.8)
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    117946023 (si:dkey-199f5.8)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ecra01003]
    117946023 (si:dkey-199f5.8)
Enzymes [BR:ecra01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     117946023 (si:dkey-199f5.8)
    2.4.1.90  N-acetyllactosamine synthase
     117946023 (si:dkey-199f5.8)
Glycosyltransferases [BR:ecra01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   117946023 (si:dkey-199f5.8)
  Glycolipid
   117946023 (si:dkey-199f5.8)
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C
Other DBs
NCBI-GeneID: 117946023
NCBI-ProteinID: XP_034729701
LinkDB
Position
6:complement(23085616..23103648)
AA seq 405 aa
MVSIQSKWRYLFMFLGIQLVVMALLSREGYQKRVSYFIRIFRKSDSTGMTGRNHTAAGIA
GGDVYANLSHLSRSHSHGDGIPYCPKTSPLIGGPIHVSFPSGLTLAEVQRKNPMVVRGGR
YRPPDCEARHRTAIIIPHRNREHHLKFLLYYLHPFLQRQQLNYGIYVIHQAGNYTFNRAK
LMNVGFREAMKEEDWDCLFFHDVDLIPEDDRNTYICDSNPKHAAIAMDKFGYKLPYKMYF
GGVSALTPLHYLKMNGFPNNYWGWGGEDDDIGVRVTLGGMYITRPSLKVGRYKMIKHKLD
KGNDVNPKRFNMLAKTRQTWKFDGMNTAEYETISRQYMPLYTNITVNIGTEAGLHPPPPP
PTPHAKVAGKLAVKAPAEVPAKGSAKPPAKLKEGDSEKKSTLRDR
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggtcagtatccagtccaaatggcgctacctgttcatgttcctgggcatccaactggtg
gtcatggcattactgtcccgagagggataccagaagagggtttcctacttcatccgcata
ttccgcaagtctgactccactggtatgacaggccgcaaccacacagcagcaggcatcgct
ggaggggatgtatatgccaacctctcccacctatccagatctcatagccatggagatggc
ataccttactgcccgaagacgtcccctcttataggtgggccgatacacgtcagcttccca
tcagggctcactctagcagaggttcagaggaaaaatccaatggtggtgcgcggaggacgc
tacaggccgcctgactgtgaggcgaggcaccgaacagccatcatcattccccacagaaac
cgagaacaccaccttaagttcttactatactacttgcatccttttctgcagcgacagcag
ctcaactatggaatttacgtcattcaccaggcgggaaactacactttcaacagggccaag
ctgatgaatgtgggtttccgggaggccatgaaggaggaagactgggactgtctcttcttc
cacgatgtggacctcattccagaggacgaccgcaacacatacatctgcgattccaacccc
aagcacgcagccatcgccatggacaagtttggctacaagcttccgtacaagatgtacttt
ggaggagtgtcagctctgacgccactgcactacctcaagatgaacggctttcccaacaac
tactggggctgggggggcgaggacgacgatattggagtcagagtgactctgggggggatg
tatatcactcgtccatccctgaaggtcggccgttacaagatgattaaacataagttggac
aaaggcaatgacgtgaacccaaaaaggttcaatatgctggccaagacgcgtcagacctgg
aagtttgatgggatgaacacagctgaatatgagacaatctcacggcaatacatgcccctc
tacaccaacatcactgtcaacattggcactgaggccggcctacatccaccgccacctcca
ccaacaccacatgccaaagttgcaggaaaacttgcagtcaaagcacctgccgaagtccca
gcaaaaggctcagccaaaccccctgccaaactcaaagagggcgactcagagaaaaagtct
accctaagagaccgttaa

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