Etheostoma cragini (Arkansas darter): 117946230
Help
Entry
117946230 CDS
T07493
Name
(RefSeq) nectin-2-like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03266
Virion - Herpesvirus
ecra04514
Cell adhesion molecules
ecra04520
Adherens junction
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117946230
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117946230
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117946230
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117946230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117946230
04090 CD molecules [BR:
ecra04090
]
117946230
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
Nectin family
117946230
CD molecules [BR:
ecra04090
]
Proteins
117946230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
ig
V-set
Ig_3
I-set
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
117946230
NCBI-ProteinID:
XP_034730119
LinkDB
All DBs
Position
6:19405356..19485944
Genome browser
AA seq
529 aa
AA seq
DB search
MARHDAQNWHICSNMIGLLCLVASILFQHGVSGQRVKVEPEVLSYPGQTVNLRCAFTDAT
GIQLTMVTWIYEPKDGDRINIAVFHPNFDPNYPNSPMNGRVSFTSSPPNLASPSIEIRDV
RMTDEGKYICEYATYPSGNEQGITYLVMLAKPHNSASIVTVEAGTKPVVVARCESVDGRP
AAQISWVTTANGNATTVSKPGANNTVTVTSEYQMVPTAADNGKDLSCVVAHRTQVKPDSF
PLKLAVQYAPEVTVVGYDNNWYLGRTHVVLTCLASGNPPPLAPQWKTMSGEMPNTVQITN
NVLKVLKVDDAVNTTFVCEVENLMGTGKGQVTVFVREPSVNPSNAGMVAGAVIGSLLALL
LVAALVAVLVTRSRRQRQGYRGNGGSDMKTRIFGGGKKASKNGTGVGAGVGGGNNNGPVY
VYNDGSSHQGLGEKNNHHHQPLTMGGRPEVVATTPTAQDILLSNELDDAERRKFDELEKE
ERYDHFSGGAPILQLRPPHDQDDMIGDYLDDDMESQRDGSVISRTAVYV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacatgatgcccaaaactggcatatctgctccaatatgatcggactgctctgc
ttggtcgcgtcgatactttttcaacacggagtgtcaggtcagcgggtgaaggtggagcca
gaggtgttgtcgtatcccggccaaacggttaacctgcgctgtgccttcactgatgccact
gggatacagctcactatggtcacgtggatctatgagccaaaggacggagacaggatcaac
atcgcggtttttcaccccaactttgatcccaactaccccaactcacccatgaacggccga
gtcagcttcacatccagccctccaaacctggccagtccctccatcgagataagggatgta
aggatgaccgatgaggggaagtacatctgcgagtatgctacctaccctagtggcaacgag
caaggcatcacgtacctcgtcatgctggctaagcctcataactcggcctccatcgtaaca
gtggaagcaggcactaagccggtcgttgtggcacgctgtgagtctgtggatggccgcccc
gctgcccagatttcctgggtgactacagccaatggcaatgcaacaacagtgtctaagccg
ggtgccaacaacaccgtgaccgtgaccagcgagtaccaaatggttcccacagctgcagac
aacgggaaagaccttagctgcgtggtggcacacaggacccaggtcaaaccagacagcttc
ccgttgaagctagcagtacaatatgcccctgaggtaacagtagtgggttatgacaataat
tggtacctgggtcgtacacacgtggtgcttacctgcctggctagtggaaaccctcctcca
ttggccccccagtggaagacgatgtcaggagagatgccaaacacggtacagatcacaaat
aacgtgctgaaggtgctgaaggtggacgacgctgtcaacaccacttttgtctgtgaagtc
gaaaacctcatggggaccggcaagggccaggtcacagtttttgtcagagagccctcagtg
aacccatccaatgctggcatggtggcaggagctgtgattggctccctgctggccctcctt
ttggtcgctgctctcgtcgctgtgcttgtcactcgtagccgcagacaacggcagggttac
cgtggcaatggcggcagtgacatgaagacacgcatatttggcggtggcaagaaggccagc
aagaacggcacgggtgtaggcgcaggcgttggaggcggtaacaacaacggccctgtctac
gtttacaacgacggctcatctcaccagggccttggagagaaaaacaaccaccaccaccag
ccgctcaccatggggggccggcctgaagttgtcgccactacgcccaccgcccaagacatc
ctcctaagtaatgagttagacgacgcagagaggaggaagtttgatgagctggagaaggag
gagaggtatgaccacttcagtggaggagcccccatccttcagcttcgcccaccgcatgac
caggacgatatgattggtgattacctggatgatgacatggagtcccagcgggatggttct
gtcatctcacggactgccgtttacgtatag
DBGET
integrated database retrieval system
