Etheostoma cragini (Arkansas darter): 117946240
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Entry
117946240 CDS
T07493
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03250
Viral life cycle - HIV-1
ecra03260
Virion - Human immunodeficiency virus
ecra04060
Cytokine-cytokine receptor interaction
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117946240 (cd4-1)
03260 Virion - Human immunodeficiency virus
117946240 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117946240 (cd4-1)
04514 Cell adhesion molecules
117946240 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ecra04090
]
117946240 (cd4-1)
CD molecules [BR:
ecra04090
]
Proteins
117946240 (cd4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
V-set
Ig_2
Izumo-Ig
C2-set
TMEM154
Cadherin_C_2
Orf78
DUF6097
DUF6249
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
117946240
NCBI-ProteinID:
XP_034730137
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All DBs
Position
6:19186126..19203323
Genome browser
AA seq
463 aa
AA seq
DB search
MKNVIQSVLLLAVLVSTKGAQELTYYVQVGETVTLKPPGVDSQKYVYWYFNGIEIAWRNN
MGTTWTYKDSPWKDRLALSDDSLIIKNLQQEDFGIFKYECKVQSETYVKKTYKLLKLTVS
VNPTAPLLPGENVALSCNAETDGHKKPEIHWLNPQGVKMRTGQLNWRATSQDNGHWTCVV
KKEQESLAKVYVTVIDLSPAPLSPQYTSTSRLLTIPCSLPSYISWEQIKAKDIQELHWQF
IPEPGLSPQELFSLSLEDPLTSKAGPIRGRHTVKDPKNKNLSLTINQVREEDRGNYVCAL
RFKNGVSLNRTVHVKVLQITSSPGTELISGQQLNLTCSLGHPLPPDLRLKWFPPEQSVLS
SSSLGSDGHPTHLTIPEVGTGDGGKWRCALWQNNTELTSAEITLKIESKLSVWMLVVICS
VAVIFLLLILVFILYQRRQRKMRHLGRRLCQCKNPKSKGFYRT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtaattcaatccgtccttctcctcgctgtgcttgtgtcaacaaaaggggca
caagagttgacatattatgtccaggtgggagagacggttacccttaagcctccaggggtt
gattcacaaaaatatgtgtactggtactttaatggcattgaaattgcctggcgcaacaac
atgggaaccacgtggacctataaagattcaccctggaaagaccggttggccttgtctgac
gactcacttattatcaaaaacctccaacaagaagactttgggatatttaaatatgaatgt
aaagtacaaagtgaaacttacgtaaagaaaacatataaactactcaaactcactgtgagt
gtgaacccaactgctcctctgctgcctggggaaaacgtggctctgtcctgcaatgcagaa
actgatggacacaaaaagccagagatacattggctgaatccccaaggagttaaaatgagg
actggacaactcaattggagagccacaagccaggacaatggccactggacttgtgttgtg
aaaaaagaacaggagagtttagccaaagtatacgttacggttattgacctctccccagct
cctttaagtcctcagtacacgtctacatcccggcttctcaccatcccctgttcccttcct
tcttacatctcttgggaacaaatcaaagctaaggacatccaggagttgcactggcaattc
atccctgaaccaggcttgagtccacaggagctgttctccctctctctggaagatccactg
acctcgaaggcaggaccaatcagaggacggcatactgtaaaagaccctaaaaacaaaaat
ctgtctttgactataaatcaagtaagggaagaagacagaggaaattatgtatgcgccctg
cggtttaaaaatggtgtgtctctgaacaggactgtacacgtgaaggtgctgcaaatcacc
tcctccccaggaacagagctaatttctggccagcagctcaacctgacttgcagtctcggc
catccgctaccccctgacctgcgactgaagtggttcccacctgagcaatcggtcctgtca
tcttcatctctgggatctgacggtcaccccacccatctcaccatcccggaagtggggaca
ggagatggtggaaagtggaggtgtgctctgtggcagaacaacacagagctgacgtcggct
gagatcactctgaagattgaatccaaactgagtgtgtggatgctggtggtcatatgcagt
gtcgcagtcatcttccttctactcatcctcgtgttcatcctctaccaacgcagacaacgg
aagatgaggcacctcgggcgtcgactctgccaatgcaaaaaccccaagtccaaaggattc
tacagaacataa
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