Etheostoma cragini (Arkansas darter): 117946699
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Entry
117946699 CDS
T07493
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00310
Lysine degradation
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117946699 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117946699 (setdb1b)
Enzymes [BR:
ecra01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
117946699 (setdb1b)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117946699 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
117946699 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
Tudor_5
DUF5604
SET
MBD
Pre-SET
Motif
Other DBs
NCBI-GeneID:
117946699
NCBI-ProteinID:
XP_034730898
LinkDB
All DBs
Position
6:17819589..17831222
Genome browser
AA seq
1272 aa
AA seq
DB search
MESSDGSYSLNVLKKEWTLNFQRFHLQQQRMEVDCWDSNLEEELGISLDELKKWIDDAVE
NSEIVQKKKAQLTELKEWVEKKEEEEATADMLLTNANKSLLECEKLVKETYQKNGLIYRE
SSSEDEGGGGDKLFSEVIEIDDDDDDDVIAVGCLVPPKMPVTPGKDPVLKEVSTALQKTS
QQLQKLVQIVNKPSAGGPLLRSPSQLPSQSATQASVPAVFVSQVLSQSMTQPNPNITEDE
LRVGMTILGKKRTKTWHRGALVAIHPVGNGIFKYKVKFDKGKSLLSGNHVAFEYNPTLEI
LYVGARVVAKYKDGNLVWLYAGIVAEMPNNKNRMRFLIFFDDGYASYVTLPELHPVCRPL
KRTWEDIEDASCRDFIEEYITAYPSRPMVLLKVGQIIKTEWEGTWWRSKVEEVDGSLVKI
LFLDDKRSEWIYRGSTRLEPMFNLKMTTANTQEKKLAGQQRTRPNMGALRSKGPVVQYTS
DGQVGASPVKTPQASTSQPSQTPQSQQRPQPPQPQQTPQPQPPQQTIQPPQPSQPLRVDN
KHQMAKKSTSPFIPGVGGTHASKIMQSLSSNPSNLPGGRMLSVQNIATPTFTQPYQRPMP
PQAPGPPPMTHTTAVIPHQPAYRAPTDRIFYLAHTCQLACLNRVRPARSDMHRGKNPLLT
PLLYDFRRMTGRRKVNRKMSFHVIYKAPCGLCLRNMEEIQHYLFQTRCDFIFLEMFCLDP
YVLVDRPFQPQRPVYYIPDITGGREDIPLSCVNEIDSTPPPEVAYSKERIPEDGVYINTS
PDFLVGCECTDGCRDKSKCSCHQLTLQATGCTPGAQINPNAGYFHKRLEECLPTGIYECN
KRCKCCAQMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDVAKGSFVCIYAGKILTDDFA
DKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSEGSGVDMSRLKIQPSALVSNPVG
RPLKKDDSKSKAQNPSSSGDSNDDDDKDSKSEDESDSSDDTFVKENYFSSSSVWRSYTTR
GQAKGNKEGSQDSKDGLSASAKGTDDEKPLSMPEEMGKNKVASWLTSQSLKKESGDNKSQ
VKLETGKKQDVMTVSDSDDVQTISSGSDDNKEREKVPTGVTKKQVAVKSTRGIALKSGHG
MMVKTGASGGGGGPGGQGGKAGQQRQSGGGGDNTLKSTRLFFDGEESCYIIDAKLEGNLG
RYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKVLLC
CCGSTECRGRLL
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcagcgatggatcatactctttaaacgtgctaaaaaaagaatggacactgaat
ttccagagatttcatttacaacaacagagaatggaggtggattgctgggactccaatctc
gaggaagagctaggcatttctttggatgagctgaagaagtggattgatgatgccgtggag
aatagcgagattgtgcagaagaaaaaggctcagctgacagagctgaaagaatgggtagag
aagaaagaagaagaggaggcgacggcggacatgcttcttaccaatgccaacaaatcctta
ttggagtgtgagaagcttgtgaaggaaacttatcagaagaacggtcttatttaccgagag
agtagctcagaggatgaggggggcggaggagataagttgttctctgaggtcatcgagata
gacgatgatgacgatgacgatgtcattgctgttggctgtttggttcctccaaagatgcct
gtcactcctggcaaagatcccgtgttaaaagaagtctccacagcgctacagaaaacctcc
cagcagttgcagaagttggtccaaattgtcaacaagccttctgcaggtggtccattgctc
cgatctccatcacagcttccatcccagtcagctactcaggcttcagtgccagcagtgttt
gtgtcccaggttctatctcagtccatgacccagcccaaccctaacataacagaagatgag
ctcagagttgggatgactattctgggaaagaaacgcaccaagacatggcacagaggtgcc
ctggttgcaattcaccctgttggaaatggcatattcaaatataaagtgaagtttgataaa
ggaaagagtttgctgtctggaaatcatgtggctttcgagtataaccccaccctggagatt
ctgtatgtcggggctcgtgtagtcgccaagtacaaggacggcaacctggtgtggctctat
gctggaatagtagcagagatgcccaacaacaaaaatcgtatgagatttttgatattcttt
gatgatggctatgcttcctatgttacactaccagagctacacccagtttgccgaccatta
aagcgtacctgggaggacatagaggacgcatcgtgtcgagacttcattgaggagtacatc
actgcatatcccagcaggcctatggtgctcctaaaggttgggcagatcatcaagacggag
tgggagggaacttggtggaggagcaaagtggaggaggtggacggcagcttggtcaagatc
ctctttttggatgacaagaggagtgagtggatttatagaggctctaccaggttggagcca
atgttcaacctgaagatgaccaccgccaacacccaggagaagaagctggctggccagcag
cgtacacgacctaacatgggggcattgaggagtaaaggcccagtagttcaatacaccagt
gacggacaagttggtgcctctcccgttaaaacaccgcaggcctcaaccagccagccttca
cagacaccacaatcacaacagcgtcctcagcccccacagccccaacaaacccctcagcct
caaccgccccaacagacgattcagcctcctcagccctcacagcctcttcgtgttgacaat
aaacatcagatggcaaagaagagtacttctccatttatccctggtgtgggaggcactcat
gcctctaagatcatgcagtctctttcctccaatcctagcaacctccccggtggaagaatg
ttgagtgtccaaaatattgctacgcccactttcacacagccgtatcagaggccgatgccc
cctcaggctcccggcccccctccaatgacacacacaacggccgttatcccacatcagccc
gcataccgcgccccgaccgaccgcatcttctacctggcgcacacttgtcagctcgcctgt
cttaatcgcgtccgacctgccagatcagacatgcacagaggaaagaaccccctcctcaca
cctttactgtatgattttagacgcatgacgggaagacgcaaagtcaaccgcaagatgtcc
ttccacgtgatttacaaggctccgtgtgggctttgtctacgtaacatggaagagatccag
cactacctcttccagactcgctgtgactttatattcttagagatgttctgtctagacccc
tatgtgctcgtggaccggcccttccagccacaaagaccagtctattacattcccgacatc
actggtggacgggaagatatcccactctcctgtgtcaacgagatcgattccaccccgcct
cctgaagtagcttacagtaaagagcgtattcctgaagatggagtatacatcaacactagt
ccagacttcctggttgggtgtgaatgcaccgacggctgtcgagacaagtcgaaatgctct
tgccaccagctgactcttcaggctacaggttgtacaccgggggcacagatcaacccaaat
gccggatatttccacaaacgattagaggagtgtctccccacagggatctacgagtgtaat
aagcggtgcaaatgctgtgctcagatgtgcaccaaccggttggtgcagcacggcctgcag
gtgcgtctccagctcttcaagacccaaaacaaaggctggggcatccgctgtctggatgat
gtggccaagggctcttttgtctgcatctatgctggtaaaatcttgacagacgattttgcc
gacaaagaaggtctagagatgggcgatgagtattttgccaatctagaccatatagagagt
gtggagaacttcaaagagggctatgagagtgaggctcactgttcggacagcgaggggagc
ggcgtggacatgtcaaggttaaaaatccaaccatccgctttagtatctaaccctgtgggg
agaccgctcaaaaaggatgattccaagtcaaaagcccaaaacccaagctcatcgggagac
agcaatgacgatgatgacaaggattcaaaaagtgaagatgaaagtgacagttccgacgac
acgtttgtgaaggaaaactacttctcttctagctctgtgtggaggagctacaccacacgt
ggtcaggccaagggcaacaaggaagggagtcaagacagtaaagatggattaagtgcatct
gccaaaggaactgatgatgagaagccgctgtccatgccagaggagatggggaaaaacaaa
gtggcttcctggctcaccagccagagtctgaagaaggaatctggagacaacaagagccaa
gtgaagttagaaacaggaaagaagcaggatgtgatgactgtttctgacagtgatgatgtt
cagaccatcagctctggatctgacgacaacaaggagagagagaaagtacccacgggcgta
acgaagaagcaggttgcagtgaaatctacacgcggcatcgccctaaagagcggccacggg
atgatggtgaaaacaggtgcatctggaggcgggggagggccggggggtcagggaggaaaa
gcaggacagcagaggcagtctgggggaggcggggacaacactctcaaaagcactcgtctg
ttctttgatggcgaggagtcctgctacatcattgatgccaagttggaaggaaaccttggt
cgttaccttaatcacagctgtagtcctaacctttttgtccagaatgtgtttgtggacaca
catgacttgaggtttccctgggtggcgttttttgccagcaagcggattcgggccggcaca
gagctgacctgggactacaactacgaggtgggcagtgtggaggggaaggtgctgctctgc
tgctgcggatccactgagtgcagaggaagactgctgtga
DBGET
integrated database retrieval system
