Etheostoma cragini (Arkansas darter): 117947284
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Entry
117947284 CDS
T07493
Name
(RefSeq) vitamin D3 receptor A
KO
K08539
vitamin D3 receptor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117947284
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117947284
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecra03310
]
117947284
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117947284
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
117947284
Nuclear receptors [BR:
ecra03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
117947284
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
117947284
NCBI-ProteinID:
XP_034731905
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Position
7:23112920..23180584
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AA seq
420 aa
AA seq
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MEPMTVTTSVAGPDEFDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTC
PFNGSCTITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQRKKDMILKRKEEEAAREAM
RPRLNEEQARIISSLVEAHHKTYDASYSDFTRFRPPVREGPVTRSASRAASLHSLSDASS
DSFNHSPESVDTKMNFSNLLMMYQDGTSSPDSNEEDTKLSMLPHLADLVSYSIQKVIGFA
KMIPGFRELTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCINDVTKAGH
SLDLLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHGRIEQLQDHLSETLQA
YIQVNHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatgacggtgacgacgtcggtggccgggccggacgagtttgaccgcaacgcc
ccgcggatctgcggtgtgtgcggtgacaaggccaccggctttcacttcaacgccatgacg
tgtgaggggtgtaagggatttttcaggcgcagcatgaagcgtaaagcctccttcacatgt
ccattcaacggaagctgcaccatcaccaaggacaaccggcgtcactgccaggcctgtcgt
ctcaaacgttgcattgatattggaatgatgaaagagttcatcctgacagacgaggaggtt
cagaggaagaaggacatgatattgaagaggaaagaagaggaggcagcccgggaggcgatg
aggccacgtctgaatgaggagcaggcccggatcatctccagtctggtggaagctcaccac
aagacctacgatgcctcctattctgacttcacccgcttcaggcctccagtgcgtgaaggc
ccagtaacgcgcagtgccagcagagctgcctcccttcattccttgtctgatgcctcctct
gactcattcaaccactcacctgagtctgtagacaccaagatgaacttcagcaacctgtta
atgatgtaccaggacggcactagcagtccagactccaatgaggaggacacaaagctttcc
atgctgcctcacctggcagacttggtctcctacagcatccagaaagtcatcggcttcgcc
aagatgatcccaggcttcagagagctgacagcagaagaccagattgctctgttgaaatcg
agtgccattgagatcatcatgctgcgttcaaaccagtcgttcagtctggaggacatgtcc
tggagctgcggtggacctgacttcaaatactgcatcaatgacgttacaaaggctggtcac
tccctggatctgttggagccgctggtgaagttccaggttggtttgaagaaactcaacctg
cacgaggaagaacatgtgctgctcatggccatctgcctgctctccccagatcgtcctggt
gtccaagaccacggccgcatcgagcagctccaggaccatctgtcagagacactgcaggcc
tacatccaggtcaaccacccaggcggacgcctcctctacgccaagatgatccagaagctg
gccgacctgcgcagcctgaacgaggagcactccaagcagtaccgctcactttccttccag
cctgagcacagcatgcagctcaccccgctggtgctggaagtgttcggcagtgaggtgtca
tag
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