Etheostoma cragini (Arkansas darter): 117947517
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Entry
117947517 CDS
T07493
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117947517 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ecra04054
]
117947517 (nod2)
Pattern recognition receptors [BR:
ecra04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117947517 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
WHD_NOD2
LRR_6
LRR_4
AAA_16
nSTAND_NTPase5
AAA_29
AAA_25
Motif
Other DBs
NCBI-GeneID:
117947517
NCBI-ProteinID:
XP_034732401
LinkDB
All DBs
Position
1:complement(28688514..28694897)
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AA seq
987 aa
AA seq
DB search
MFVQELVLRQRAEILNALCSSGSAEHLEQVLDILLAQGELIWEDYQNIQVPGRALYANAR
ELLDLVYTKGLETCGLFLAALKQVLPNVHSVDFTFSGYCSNLEEKEEYQSTSTQTLLTQR
PSLVSKLQCCIDGALKALVTSGHFTSADCDEVRLPIHTPSQQARRLLDHVRSKGESAAKV
VLQYIQQEQESESPHEKWTPPKEVLKYQKKLSSSVSAQSCFLSTYAGTSHMSLDDIYTKC
ELELAHNCVDVHGPLGLEDILGTVGTVNEDADTVLVSGDAGGGKSTLLQRLHLLWARGSA
FQDFLLLFPFSCRRLNSETRELSVQELLFQHCCWPDREQEEIFQFILDNPHLILFTFDGL
DELKQSFSDEHRLCCPTQRAPVHILLFNLIQGSLLKGVRKVVTSRPEAVGHVLKKHLRKE
VLLKGFSPSGVDCFVRKHHSDPTVAAKVLESLQTNPALLGLCHSPVLCWIVSQCHVELLG
CGEGSPQTITDVYLMILQHFFQHQTSPKSSTGLDWLQEHLHTVLHLGKLAFEGIGATCYI
FSDPDLETCGVTEKDICMGFLIQSKDMPPTHSKCYEFLHVTLQCFFAALYIVLSNNTDRS
TIPRLFEPQNMRETGLSSTCFMACIPSADKQGWALEGETRAAETPNLQITATFVSGLLSQ
RHQRLWLHCCSTDVIEKRVRQVVRCLSKGMQKHFKSIPQPVEGEKKSMHAMPDFVWLIKC
IYELQESKIAKNAMSKLEVDHLKLTYCNIGPVECTALAYVLQHLRKPVGLQLDNNSVGDV
GVEQLLPCMHICNSLYLRNNNITDEGIRKLLAKGIQCDNFRKIALFNNKLTDACTQHFSH
FLKTKQNFLSLRLGNNNITEEGARQLAEGLKVNRSLQYLGLWGNKIGDAGTVALASALES
SKSLVWLSLVGNCVGSAGACALANIIKNSASLEELWLTENCITRTGVECLIEALEHNTHV
KSVWLRNNDLSLQEVEEMTQRESRLTF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccaggagcttgtgctgagacaacgggcagagatactgaatgcactgtgcagc
agcgggtcagctgaacatctggaacaggttctggacatactgctggcccagggggagctc
atatgggaggattaccagaacatacaggtaccaggtagggcactgtatgccaatgccaga
gagttgctcgacctggtttatacaaagggtttggaaacctgtgggctcttccttgctgct
ctcaaacaggtcctgccaaacgtgcatagcgttgacttcactttttccggatactgttca
aatctagaggaaaaagaagaatatcaaagcacatctactcaaactcttctgactcaaaga
ccaagcctggtcagcaagctacaatgctgcattgatggtgctctaaaagctcttgtcaca
tcaggacacttcacctcagcagactgcgatgaagtgcggctacctatacacaccccctct
cagcaggcgaggcgtttacttgaccatgtcagatcaaaaggagaatcagcggcgaaggtt
gtactgcagtacattcagcaagaacaggaatctgaatctccacatgagaaatggactcct
cccaaagaggtcttaaagtatcagaagaagctcagcagttctgtgtctgctcagtcctgc
tttctcagtacttatgcagggaccagccacatgtctctggatgacatctatactaaatgc
gagctggaactagctcataattgtgttgatgtccatggacctttgggcttggaagacata
cttggtacagtgggtacagtgaacgaggatgccgacacggtgctggtgtctggggatgct
ggtggtgggaagagcaccttactccaaagactgcacttgctttgggctcgggggtcagcc
ttccaggactttctccttctgtttccatttagctgtcgcaggttaaactcagaaaccagg
gaactgtctgttcaggaattgctgtttcagcactgctgttggccagacagggagcaggag
gagattttccagttcatcctggacaacccacatctcatcctcttcacctttgatggcctg
gatgagctcaagcagagcttttcagatgagcacaggctctgctgccccacccagcgtgca
cctgtacatatactattgttcaacttaatccagggttccctactaaagggagtgcgaaaa
gtggtgactagtcgcccagaggcagtgggacatgtgttgaagaaacacctccgcaaagag
gtcctcctgaaaggtttttccccaagcggagttgactgttttgtgaggaagcatcacagt
gaccccactgtagctgctaaggttttggagtctctacagacaaacccagctttacttgga
ttgtgtcatagtccagtcctctgctggattgtctcccagtgccatgttgagctgttgggc
tgtggagaaggcagcccacaaacaatcacagacgtttacctaatgatcctacagcacttt
ttccagcatcaaacctccccaaagagctccacagggttagattggcttcaggagcaccta
cacacagtcttgcatctaggaaagcttgcctttgaggggataggagccacctgttacatc
ttctcagatccagatttggagacatgtggtgtaactgagaaagatatctgcatggggttt
ctcattcaaagcaaagatatgccccccacccacagtaaatgctatgaattccttcatgtg
actctgcaatgtttttttgctgctctgtacattgttttgtcaaataatactgaccgctca
actatccctaggctctttgagccacagaacatgagggagacaggtctgagcagcacatgt
ttcatggcctgcataccttctgctgacaaacaagggtgggctttagagggggaaactaga
gcagctgaaacaccaaatctgcaaataacagccacctttgtgtctggactactgtcccag
cgccaccaaagactttggctccactgctgctccactgatgtgatagagaagagggtcaga
caggtggtgagatgcctgtccaaaggcatgcagaaacactttaagtccatccctcaacct
gtagagggggagaagaagagcatgcatgcaatgccggactttgtctggcttataaaatgc
atctatgagctgcaggagagcaagattgctaaaaatgccatgagtaagcttgaagtggac
cacttgaaactgacctactgtaacattggtcctgtagagtgcactgcactagcttatgtt
ctccagcatttaaggaaacctgtaggcctccagctggacaacaactctgtaggcgatgtt
ggagtggaacaacttcttccctgcatgcacatttgtaattccctgtatcttagaaataat
aacattacagatgaggggatccgcaaactgcttgccaaaggtatccagtgtgacaacttc
cggaaaattgcgctcttcaacaacaagctaactgatgcttgcacacaacacttttctcat
tttctgaagaccaagcagaatttcctctctctaaggttaggcaacaataatataacagaa
gaaggagcaaggcagctggcagagggactgaaagtcaaccgttcattgcagtatttaggg
ctttggggcaacaagataggtgatgcaggaacagtggcccttgccagtgccctagagagc
agcaaatctctggtgtggctaagcctggtaggcaattgtgtggggagtgcaggagcatgt
gcccttgccaacattatcaagaacagtgcgtcactggaagaactttggttgacagagaac
tgcataaccagaacaggagtggaatgtctgattgaagccctagaacataatactcatgtg
aaatcagtatggttgagaaacaatgacctcagtttgcaggaggtagaggagatgacacaa
cgggaatcgagactcaccttctga
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