Etheostoma cragini (Arkansas darter): 117947628
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Entry
117947628 CDS
T07493
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117947628
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
117947628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
UTP20_C
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
117947628
NCBI-ProteinID:
XP_034732623
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All DBs
Position
7:13734795..13750079
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AA seq
712 aa
AA seq
DB search
MMAPEPLRSATTSKGREDTSLALPSDNKLHSGQQRVLHQVHTIERSKSKHGKSGSPTLSR
TSLPSQTLTTYEFGSFKFSPSKANGSFSRTNSTLSTGYNKSVKTQSRTLSARTTRGRQVS
SGLWDQQINTSSWPKATNGLRSARSDPALAHPFSATTMRGKGMLAQGEHSLQSQINRNST
YSVTDGTHMTNSQTRIVQPPSALYRNEGKMGTIKTSNIEQQAAANSAINMPDMTLKEAVV
FLSHHEENYQQCGATFIHHASFKEESAKREVLKLQGIPVLVSLLRSPYPGVSQAVAGALR
NLVFKDQNNKLEVQRCGGIAKALQLLKETNSTETQKQITGLLWNLSSADELKAELIATAL
PALTENVVVPFTCWSDDSANNNIHPDVFNSATGCLRNLSCGQMKERQAMRACRGLIDSLM
GYVQSCVAEESPDDKSVENCACILHNLTYKLEDESPECFNKFQLEKEGQHGRMKSPTIGC
FSPKSSKAQKEFLFDAVRGMPEDSKPSGVKWLCHPIAMQTYLSLLGSSQNGATLEACSGA
LQNLTAGKGLGSSAMSQILVQKLGALLHIPRLLKSPNRSLQKTAMSLLGNMSRTSSLQTT
MAKQILPELTSLVSSGPREMGNSDETIATACNTLRSLMLADTEVSKKFVKSELVSSVADL
CENPSFPKGNKAASLLLYSLWNDKNLQGIAKKQGMAKSLFVNDSYAQVGAGY
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggagccgctgcgttcagcaacgactagtaaaggcagggaggacacgtcg
ctcgccttgccctccgacaacaagctgcactcgggacagcagcgcgtgctgcatcaagta
cacactatcgagaggagcaagtccaaacacgggaagagcggctcaccaacactctcacga
acaagcctgccctcccagactttgacaacatatgagtttgggtcgttcaagttttctcca
tccaaagcaaatggctccttcagtcgtaccaactccactctgtcaacaggctacaacaaa
tcggtaaagactcagagtcgtaccctatccgctagaaccacgagaggaagacaagtcagc
tctggcttatgggatcagcaaatcaacacttccagctggcccaaggccaccaatgggctg
agatctgctcgcagtgacccggccttggctcatccattttctgcaaccactatgcgaggc
aaagggatgttggctcagggcgagcacagccttcagagtcagataaatagaaacagcacc
tattcggtgaccgacggcacacacatgaccaacagccagacacgtatcgtccagccgccc
tctgccctgtatcgcaatgagggcaaaatgggcaccatcaaaacatccaacatagagcag
caagcagcggctaacagtgcgataaacatgccagacatgaccctaaaggaggctgtagtg
ttcctgtctcaccatgaagagaattaccagcagtgcggcgccaccttcatccaccacgcc
tccttcaaagaggagagcgccaaacgggaggttttgaaactacaaggtatccctgttttg
gtgtcacttctgcggagcccctatcctggggtgagccaggctgttgctggtgctctgaga
aacctggtattcaaagaccagaacaacaagctggaggttcagcgctgtggcggtatagcc
aaggccctgcagctactaaaggagacaaattctactgagacccagaaacaaatcactggc
cttttatggaacctgtcctctgccgatgaactgaaggcagaacttatagctacagcgctg
cctgcactgactgagaatgtggtggtgccattcacctgctggtcagacgacagcgccaac
aacaacatacaccccgatgtcttcaacagcgccacagggtgccttcggaacctgagctgc
ggccaaatgaaggagaggcaggcaatgagagcgtgccgtggcctcattgactccctcatg
ggttatgtccagtcctgtgtggcagaggaaagccctgatgacaagtctgtggagaactgt
gcatgcatcctccataacttgacttataaactggaggacgagtctcccgagtgcttcaac
aagttccaacttgagaaagaaggccaacatgggagaatgaaaagccccacgattggatgc
ttcagcccaaagagcagcaaggctcaaaaggagtttttatttgatgcggtgcgggggatg
ccagaggacagcaagccatcaggtgtgaagtggttgtgccatcccatagccatgcagacc
tacctgtctctgctaggctcgtcccagaatggtgccacactggaagcctgcagtggtgcc
ctgcagaacctcactgccggcaagggactggggtcgagtgccatgtctcagattctggtt
caaaagctgggggctctgctgcacataccccgtcttttaaagtctcctaaccggagcctg
cagaagactgccatgtcccttctgggtaacatgtctcggaccagcagtttgcagactacc
atggcaaagcagattctgcctgagctcaccagcctcgtctcctctggccctcgagagatg
ggaaactctgacgaaacaatagcaacagcatgcaacacattgcggagtctgatgttggca
gacactgaggtcagcaagaagtttgtcaaaagtgaactggtgtcatcagtggctgacctc
tgcgagaacccctctttccccaaaggcaacaaagcagcttccttgctcctctacagctta
tggaacgataagaatttgcaaggcatagcgaaaaagcaggggatggccaaatcacttttt
gtcaatgacagctatgcacaggtcggtgcaggttattga
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