Etheostoma cragini (Arkansas darter): 117947818
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Entry
117947818 CDS
T07493
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117947818 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ecra04052
]
117947818 (bdnf)
Cytokines and neuropeptides [BR:
ecra04052
]
Cytokines
Growth factors (RTK binding)
117947818 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
117947818
NCBI-ProteinID:
XP_034733001
LinkDB
All DBs
Position
1:complement(16579804..16595456)
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AA seq
297 aa
AA seq
DB search
MTRINFFLLYLTGKKRSTEFDNFHQVRRVMTILFLTMVISYFSCMRAAPLRDAPGMRGHR
TEGYLGAAAAARGHGTPQSGGGPGQRGELPSLTDTFEQVIEELLEVEGEAAQLGQGADKS
QGGGGPSSVVTTETKDVDLYDSRVMISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHS
DPSRRGELSVCDSISQWVTAVDKKTAIDMSGQTVTVMEKVPVPNGQLKQYFYETKCNPMG
YTKEGCRGIDKRHYNSQCRTTQSYVRALTMDSKKKIAWRFIRIDTSCVCTLTIKRGR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggattaacttttttctgttgtatctgactgggaaaaaacgcagcacagaattt
gacaatttccaccaggttagaagagtgatgaccatcctgttccttactatggttatttca
tacttcagttgcatgagagctgcgcccctgagagacgccccgggcatgcggggccatcgg
acggaaggctacttgggcgctgctgcggccgcacgaggccatgggactccacagagtggt
ggtgggccaggccagcgtggggaactgccctcactcacagacacgtttgagcaggtgata
gaggagctgctggaggtggagggagaggcagcacagctgggacagggggctgataagagc
cagggaggtgggggcccgtcctctgtggttaccacagagaccaaggatgtcgacctgtac
gactcgcgggtgatgatcagcaaccaagtgcctttggagccaccgttgctctttcttctg
gaggaatacaaaaactatctggatgccgctaatatgtccatgagggtgcggcgacactcc
gatccctcgcggcgtggagagctcagtgtgtgtgacagtattagccagtgggtgacagct
gtggataaaaagacggcaatagacatgtctgggcagacagttaccgtcatggaaaaggtc
cctgttcccaacggccaactgaagcaatacttttatgagaccaaatgcaaccccatgggg
tacacaaaggagggctgcagaggaatagacaagcggcattacaattcccaatgcaggaca
acccagtcctacgtgcgagcacttaccatggatagcaaaaagaagattgcctggcggttt
ataaggatagacacttcatgtgtatgcacattgaccattaaaagagggagatag
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