Etheostoma cragini (Arkansas darter): 117947924
Help
Entry
117947924 CDS
T07493
Symbol
cd40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 isoform X1
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04060
Cytokine-cytokine receptor interaction
ecra04514
Cell adhesion molecule (CAM) interaction
ecra04620
Toll-like receptor signaling pathway
ecra04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117947924 (cd40)
04514 Cell adhesion molecule (CAM) interaction
117947924 (cd40)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117947924 (cd40)
04672 Intestinal immune network for IgA production
117947924 (cd40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
ecra04050
]
117947924 (cd40)
04090 CD molecules [BR:
ecra04090
]
117947924 (cd40)
Cytokine receptors [BR:
ecra04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117947924 (cd40)
CD molecules [BR:
ecra04090
]
Proteins
117947924 (cd40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
AKAP_110
Motif
Other DBs
NCBI-GeneID:
117947924
NCBI-ProteinID:
XP_034733185
LinkDB
All DBs
Position
7:complement(6489644..6498500)
Genome browser
AA seq
333 aa
AA seq
DB search
MHALLLLLLGFVAMTTAQPQCDPLTEHELHGQCCKMCGPGTRMLSSSLPSSCQDPQCVEC
GDNEYQEQYTKETKCQRQPYCDPHKNFQTVVHKSKEKQSPCVCKEGFHCSSKECITCVPH
TLCKPGYGVQNIATHMKDTVCQKCPEGTFSNDSSWHGVCMEWTVCESGYHIRQSGTDVSD
NICEETSRRHIVLFVVVALVVGVSAILVIVYCLCKGKEEDARGKVKVCVGSCFGDGRQPL
RETRVLITNPTDATEEESMKLPELQSSQEEGGAGTPEENEDQQNQEISAGPFLTENGKLV
TEEYGKSSVLSRQESQPHTFTDSSTSTAFTPIT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcgctgctgctgctgctgctgggctttgtggcgatgaccactgctcagccccag
tgtgacccactaactgaacatgagttgcatggccaatgctgcaaaatgtgtggcccaggg
accagaatgttgtcatcatccctccccagctcttgtcaggatcctcagtgcgtagaatgt
ggggacaatgaatatcaggagcaatacacaaaggaaaccaagtgtcaacgtcagccatac
tgcgacccacataaaaactttcagactgttgtccataaaagcaaggagaaacagagcccc
tgcgtgtgtaaagagggattccactgctccagtaaagaatgcataacctgtgtgccgcac
acactctgtaaaccagggtatggggttcaaaacatagccacccatatgaaggacacagtg
tgtcagaaatgccctgaaggcacattttccaacgacagctcgtggcacggtgtctgcatg
gaatggacagtatgtgagagtggataccatattcgacaaagcggaacagacgtatctgac
aacatctgtgaggaaacctcaaggaggcacatagttctgttcgtcgttgtggctcttgtg
gttggagtttcagccatacttgtaattgtgtattgtctatgcaaaggtaaagaagaagac
gcacgtggaaaggtaaaggtctgtgttggttcatgtttcggagatggaaggcagccactg
agagaaaccagagtactgataacaaacccaacggatgcgactgaggaggagtccatgaag
ctgcctgagctgcagtcctcacaagaggagggcggtgcggggacaccggaggaaaacgag
gaccagcagaaccaggaaatttcagcaggtccatttctcactgagaatggaaagttggtg
actgaggagtatgggaaatcatcagtcctctcacgacaggaatcccaaccgcatacgttt
acagacagcagcactagcaccgctttcacaccaataacttaa
DBGET
integrated database retrieval system
