Etheostoma cragini (Arkansas darter): 117948128
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Entry
117948128 CDS
T07493
Symbol
nup210
Name
(RefSeq) nuclear pore membrane glycoprotein 210
KO
K14314
nuclear pore complex protein Nup210
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117948128 (nup210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117948128 (nup210)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117948128 (nup210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_9th
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_15th
Ig_NUP210_4th
Ig_NUP210_6th
NUP210_Ig
Big_2
AlphaC_N
Motif
Other DBs
NCBI-GeneID:
117948128
NCBI-ProteinID:
XP_034733502
LinkDB
All DBs
Position
7:complement(10171062..10196803)
Genome browser
AA seq
1886 aa
AA seq
DB search
MTSLKLSVLALPLFIIVIQVNGSSKLNIPKVLLPLARSTRINFTLETTEGCYRWSSTRPE
VASIQAVNEESGSGCSRRAVLQALSTQPSRLTSIILAEDVVTGQVLRCDAIVDIVSEIQI
VSTTRELHLEDSPLALKIQALDSEGNTFSTLAGLVFDWTLVKDVDVNGFSDSYNSLRVLK
FSESTYTPPGYISEMERVGKQGDIILVSGLKTGHAKLKAKIQESLYKDVGAAEVRLLILE
NILLSPAHDVYLLAGTSIQYKVLKIRQGSITELSMPCDQYQLHLQNSVIGTNGNPNVAVA
SLDQSTSRVTATQLGYINVVLDHKSLRMQGVSRLPNSTLYVVEPGYLGFKIHPGDSWVLE
TGRVYDILIEVFDKSSNKIYLSDNVRIGTGFPLEYFELLESSLNGSYHRVKALKEGLTLI
DATLKAVVDENGRVHALANPVHNEQDVEIYNPIVLSPSILTFPWQPKVGAYQYTIKATGG
SGNFSWSSSNTAVATVTVKGVMTTVSDIGVSVIYAHDLRNPLHFGQMKVYVVEPVAMDFA
PCPVEARVGLVLDLPLRIFGLLEEAEKQRVMLSDCSHFDLQVEQENHGVFQLLDGRLVPG
QEHCSGVRAKALATGYTILTVSYTHGNVHLSAKITIAAYLPLRAIDPVSVAVVTLGSSKD
MLFEGGPRPWVLEPSKFFCNLSAEDEASVRLTLTSPSSHNYNQHWVRATCRALGEQVLEV
MVGNKASVTNPYPAVEPAVVKFVCAPPSRLTLVPVYTSPQLDLTCPLLQQNKQVVPVSNY
HNPILDLAAFDQQGRKFDNFSSLSILWESTMVSLASIEPTMPMELQLFQDGNKQMKLHGR
QTVLVHHQTGIAAITVTALGYQVLHLTAAKVPSPYDPMTPVSATLELLLVEDVKVSPDTV
TIYNHPDVRANLALREGSGYFFVNTSVKGVANVEFQEAQGTAQVSPVYPGEVKVMVHDLC
LAFPAPAMATVRISDILEVYVRVVDKVEIGQSVRAYVRVLDDNKRPFPASYFHFMNLKLK
AASAIVSLKRLAESTETDTAVFVVKGASIGQTTLSGVVVDKHGKKISSAPQQIEVFPPFK
LIPRKMTLLIGAMMQITSEGGPQPQSNILFSISKEEIASVNGMGHVRGVTIGNVTVTGLV
QAVDAETGKLVVVSQDQVEIEVVQLTGIRIRAPITRMKTKAQMPVYVMGLTNSQTPFSFG
NAVPGLTFTWSTTKRDILDVQQRHTEANMEIQSEHNFGMRVTGKTRGRTGLKVVLRVTDP
KAGQLVGNLLELTDEIQIQVYDKLHMLKPEVEAGELLMAPNSALKLQTSRDGVGALSYRM
LDCPDQVVVAQVDDKGSLFSGSLTGISSLLITSQETFGVNQTLILALKVVPVSYVRFSTS
PVLYMHTRESLKAFPLGIVLTFTVNFHASSGEALHSSNSHLMFSTNRDDLVQVGIGPGNH
TLTVRTINVGFTLLAVWDSENVGVADYVPLPVEHAIHPHEAHRLVVGDVVCFTAQLTSPD
GVHGTWSSSANGVLQVDSKSGAAVARDSGTVTVYYEIPGVLKTYREVVVEATTKTAAIAQ
ATPVRIAKETKVLLTTRGKGTNLIGTCSSAQAEAVSLLQPETSVSCHLSFTSDAIDFSAN
DVFKTHTSFDSSIGSYTCSITLQPMTDQQTRVLSMSMTDLLVKAGLEGSAFSGEQVSTSL
PIEPGLYSDQTELLLSNLHPSAELTVYGPTASLSNMEVVSSSPNIAVQENEVHHGFPSFS
KYTISAVDPQTAASASISISSTSCGQSIVIPVTLIQVADPNAAKLAAASPVVNMEGGHSL
HSFINSYQMMFFTLFALLAGTAIIIIVLHTVFSPREQAYHPAFIQRTPPPISALDSPVGN
SFNRTIPRLDPNSSPRSRLYSPDYKS
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgttaaaattatcagtgttggcattgccgttatttataattgtcattcaagtt
aacggttcctcgaaactaaatattcccaaagtgttgctaccgcttgctagaagtacacga
attaacttcacattggaaactactgaaggttgctacagatggtcttccaccagaccagag
gtagcaagcatccaggctgtgaatgaggagagtggcagtggctgctcccggagagctgtt
ctccaggctctctccacccagccctccagactgaccagcatcattctggctgaagatgtt
gttacaggacaggtactgcgttgtgacgccattgtcgacattgtcagcgagatccagata
gtgtcgaccaccagagagctacatcttgaggactcaccactggcactcaaaattcaagca
ctggactctgaaggaaacaccttcagcacccttgcaggtctagtttttgactggacctta
gtgaaagatgtagatgtgaatggattctctgactcttacaattcattacgggtactaaaa
ttctcagaatccacctacacaccccctggatacatatctgaaatggaacgagttgggaaa
cagggtgatattattttggtttcaggactgaaaacaggacatgctaaactaaaggccaaa
atacaagagtcgttgtataaggatgtgggtgctgcagaggtaagactgctgattttagag
aacattctgctgagtcctgcacatgacgtttacttgctggcgggaacttccatccaatac
aaagtcttgaagataagacagggctccatcacagagctctctatgccttgtgatcagtat
caactacaccttcagaacagtgtgattggcactaatggaaacccaaatgttgctgtggcc
agtctggatcaaagcacttccagagttacagcaactcaacttggatacatcaacgtggtg
ctggatcataagagccttcgaatgcaaggagtatctcgcctacccaacagcacactgtat
gtggttgaaccaggctacctaggttttaaaattcatccaggagacagctgggttctcgaa
acaggcagagtatacgatatcctcatcgaagtctttgataaatccagcaacaaaatttac
ctctccgataatgtccgtattggcactggtttccccctggagtactttgaactcctggag
tcttctctgaatggatcatatcatcgtgtcaaagcactcaaggaaggcctaactctcatt
gatgctaccctgaaagctgttgtagatgaaaatggaagggtccatgcactcgccaaccca
gtccacaatgaacaggatgtagaaatctataaccctatagttcttagtcccagtattctg
acatttccatggcagcccaaggttggagcttatcagtacacaataaaggcgacagggggt
agcggaaatttcagttggtcatcctccaacacagctgtggccacagtgactgtgaaagga
gtgatgacaacagtcagtgacattggcgtcagtgtaatttatgctcatgatctacgcaac
ccactacactttggccagatgaaggtgtatgttgttgagcctgtggccatggactttgct
ccttgcccagtagaggccagggtgggcctggttctcgatctgcccctcaggatttttggc
ctcctggaggaggcggagaaacagcgggtcatgctgagtgactgctcccactttgaccta
caggttgagcaggagaaccatggcgtcttccaactactagacgggaggctggttccaggc
caggagcactgcagtggggtgagagccaaggccctggccactgggtacaccatactaact
gtgagctacacccacggcaacgttcacctcagtgccaagatcaccatcgctgcctatctt
cctcttagagcgattgaccctgtatctgtggccgtggtgactctgggctcgtcaaaagac
atgttgtttgagggcgggccacgaccttgggttttagagccctctaagttcttctgcaac
ttgagcgctgaggatgaggccagtgttcgcctaacgctgaccagtccctcatctcacaac
tataaccagcactgggtcagagcaacctgcagggccctgggagagcaggtgctggaggtg
atggtgggtaacaaggccagtgtgaccaatccttatcctgctgtggagccggcagtggtc
aagtttgtatgtgcccctccgtctcgcctcaccctggtcccagtgtataccagcccacag
ctggacctgacctgcccgcttctgcagcagaacaaacaagtggtacctgtttccaattac
cacaatcccattttggatttggctgcttttgatcaacaaggaaggaagtttgacaacttc
agctctctgagcatattgtgggaatctaccatggtgtcactggccagtattgaacccact
atgcccatggagctacagctgttccaggatggcaacaaacagatgaaacttcacggacgg
cagacagttcttgtccatcatcaaacaggcattgctgccatcacagtgacagctctgggt
taccaggttttacatctcactgcagccaaagttcccagtccatatgaccccatgacccct
gtctcagccaccctggagcttctattggtcgaagatgtgaaagtttctcctgacacagtt
accatatacaatcaccctgatgttcgggcaaatttggccctgcgagaaggatcagggtac
ttttttgtcaataccagtgttaaaggggtagcgaacgtggaattccaggaggcccaagga
acagctcaggtctctccagtctacccaggggaggtgaaggtgatggttcatgacctttgt
ctggcatttccagcccctgccatggccactgtacgaatttctgacatcctggaggtttat
gtgagagtggttgacaaggtggagattggccaatctgtgagagcttatgtcagagtcttg
gatgataataagaggcccttcccagccagctattttcatttcatgaatcttaaactcaaa
gcagcttctgcgatcgtctctcttaaacgattagctgagtccacagaaacagataccgct
gtttttgtggtgaaaggtgcttctattggtcagaccactctctcaggtgttgttgtggat
aaacacgggaaaaagatttcatctgcacctcagcaaattgaggtatttccaccgttcaaa
ctcatcccaaggaaaatgactctgttaattggagcaatgatgcagatcacatctgagggg
ggccctcagcctcagtccaatatccttttctctatttccaaggaggaaatagcttctgtt
aatggcatgggccacgtcagaggtgttaccattggtaatgtcactgtgactggactggtc
caagctgttgatgctgagactgggaaactagttgttgtgtctcaggatcaagtagaaatt
gaggttgtgcaattgacgggcattcgaatcagagcacctatcacaagaatgaagacaaag
gcacagatgcctgtatatgtgatgggtctgaccaatagtcaaacacccttctcctttggc
aatgctgtacctggcctcaccttcacctggtccaccaccaagcgagacattctcgatgtt
cagcaaagacacactgaggctaacatggagatccagtcagagcacaattttggcatgagg
gtgactggaaaaacgagagggcggacagggctgaaggtggtgctcagagttactgacccc
aaggctgggcagctagtgggaaatctgctggagctcacggatgagatccagatccaggtc
tatgacaagctgcatatgcttaagccagaagtagaggctggggagttactgatggctccg
aactcagctctcaaactgcaaactagcagggatggtgtaggcgcactctcttatcgaatg
ctggattgccctgaccaggtcgttgttgctcaagtggatgataagggctccctcttctct
ggctctcttacgggcatctcctctctgctgatcacctcccaagagacctttggtgtcaat
caaactctcatccttgctttgaaggtagtacctgtgtcctacgtgcgcttcagtaccagt
ccagttctctacatgcacaccagagagagccttaaagccttccctctgggcatagtgctc
accttcactgtcaactttcatgccagctctggagaagccctacacagctccaactcccac
cttatgttttccacaaacagagatgacctggtgcaagtcgggattgggcctggtaaccac
actctgacagtgaggaccatcaatgtaggctttactcttcttgcggtgtgggacagtgaa
aacgtgggcgtggcggactatgtcccactacctgtcgagcacgccattcatccacatgaa
gcccacagactggtggtgggggatgtggtctgcttcactgcacagttaaccagcccggat
ggtgttcatggtacttggagctcctcagctaatggtgttcttcaggtggactctaaaagt
ggtgcagcagtagccagagactctggcacagttactgtgtactacgagatacctggtgtt
ttgaaaacatacagagaggtggtagtagaagcaactacaaagacggctgctatagcgcag
gctacacctgtcaggatcgccaaggaaacaaaggtcctactcactaccagagggaaagga
accaacctcattggaacctgttcctctgcccaggctgaagctgtttctctgctgcagcca
gaaacctctgtcagctgtcatctcagcttcaccagtgatgccattgacttctctgctaat
gatgtcttcaaaacacacacaagctttgactccagcattggctcctacacttgctccata
accttgcagccgatgactgaccaacagacgcgtgtgctcagcatgtccatgaccgacctg
ctggtgaaggcaggcctggagggcagtgccttctctggggaacaagtcagcaccagcctg
cccatagagccaggcctctattctgaccagaccgagctgcttctctcaaacctgcaccca
tcagcggaactcaccgtctacggccccactgcttccctgtccaacatggaggtggtgtct
tcttctcccaacattgccgtccaagagaatgaggttcaccatggtttccctagtttctct
aagtacaccatcagcgctgtggacccccagacagcggcctctgcttccatttccataagc
agcacctcctgcggacagagtattgtcatcccagtcactttaattcaagtggctgatccc
aacgctgccaagctagctgctgcatctccagttgttaacatggaggggggccactctctg
cacagcttcataaacagctaccagatgatgttcttcaccctgttcgctctgctggccggg
acagccatcatcatcattgtcctccacactgtgttcagcccaagggagcaagcttatcac
cctgccttcatccagaggacaccaccacccatttcagctttagactctccagtaggaaat
tcctttaaccgtacgataccgaggttggacccaaacagcagccccaggtcgcgtctctat
tctccagactacaagtcctga
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