Etheostoma cragini (Arkansas darter): 117948732
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Entry
117948732 CDS
T07493
Symbol
tdg.1
Name
(RefSeq) thymine DNA glycosylase, tandem duplicate 1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117948732 (tdg.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117948732 (tdg.1)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
117948732 (tdg.1)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117948732 (tdg.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
117948732
NCBI-ProteinID:
XP_034734426
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Position
8:complement(4957633..4964107)
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AA seq
449 aa
AA seq
DB search
MEDKLNGFPVVSPEYLQQWVQSAQQFQALQAQYSGFNHNHQSHYPEEQTGETAMAHMGYP
EPMMDQQEPANPGKPPAKKRGRPAQPKEPKAPKPPKVPKAPKPPKDPNAPKAKPGPKPKK
ATEAQADGKQEKIDESFKKVKRKIDRFKGMSEEEVMTKTLPDLLEYNLDYVIIGINPGLM
AAFIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTTLPVKYKMGFTNMVARATPGSKDLS
SKELREGGKILVEKLKKFKPLIAVFNGKCIYEMFCREMFGKKPKKLDFGLQPHKIPDCDV
ALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDELKGLQKSTEIEEVDYRFDLKLAKEDA
KRMAIKEEQYDPGYEDAYGGAYAEREPEEGPAQSQPNGHCTFPNVENTDGAQEATTSQIP
GQLPDGQWMTQSFADEIPDISGGAKDGSV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagctgaatggattccctgttgtctccccggagtatcttcaacagtgggtt
cagtctgcccaacagtttcaagctctccaggcccaatattcaggcttcaaccacaatcat
cagtctcactacccggaggagcagacaggagagacagccatggcacacatgggttatcca
gaacccatgatggatcagcaggaaccagccaatccgggaaaacccccagccaaaaagaga
ggcagaccagctcaacccaaggaacccaaggctcctaaaccaccaaaagtccccaaggca
ccaaagccacctaaggacccaaatgcacctaaagccaaacctggtcctaagcccaagaaa
gccactgaggctcaggcagatggcaagcaagagaaaattgatgagagcttcaagaaggtt
aagaggaaaattgaccgcttcaagggaatgtcagaggaggaagtcatgacaaaaactcta
ccagaccttctggaatacaacctggactatgtcattattggcattaatccaggactgatg
gcagctttcattggacggtggtttccaggtcctggaaatcatttttggaagtgcctgttt
ctgtctggatttactgaggagcaacttaaccacatgcacgacactactctgcctgtcaaa
tacaaaatgggctttaccaacatggtggccagggcgacaccagggagcaaagacctctca
agtaaagagttgcgtgaaggtggcaaaattcttgtagagaagctgaagaaattcaagcct
ctaattgctgtttttaatggaaaatgcatctatgaaatgttctgcagagagatgtttggt
aaaaaaccaaagaaacttgactttggtttgcagccacacaagatccccgactgtgacgtg
gctttgtatctgatgccttcatccagcgctcgttgtgctcagttccctcgtgctcaggac
aaagtccacttttacatcaaactgagggagctccgagatgagctaaagggcctccaaaag
agcactgagatcgaggaggtcgactacaggtttgacctgaaattggccaaggaggatgcc
aagaggatggcgataaaggaggagcagtacgatcctggttatgaagatgcctacggtgga
gcatatgcagaaagagaacctgaggaaggtccagcccaaagccagcccaacggtcactgt
acattcccaaatgtagaaaacacagatggagcacaggaggcgacgacgtcacaaatacca
ggccagctcccagacggacagtggatgacccagtcctttgcagacgagattccagacatc
agcggcggagccaaggatggcagcgtataa
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