Etheostoma cragini (Arkansas darter): 117949310
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Entry
117949310 CDS
T07493
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117949310 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117949310 (tdg.2)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
117949310 (tdg.2)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
117949310 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AT_hook
TFIIA
Motif
Other DBs
NCBI-GeneID:
117949310
NCBI-ProteinID:
XP_034735339
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All DBs
Position
8:complement(4965232..4970850)
Genome browser
AA seq
433 aa
AA seq
DB search
MLMYSNKSTVKMEENQYTSLTVPTDYFQQWYQSSQQHPEAQYVMPYHNTGHYTEGPRDEL
VMAELSVHREPPVYQEPFYQNYNPPAQNHYQDLTYQSNVREQQQQQQQQQQQQHPPAHPH
HTQHQHTIQQQEPNVQPQPQPAGQPQVVTPVKKKRGRPPKQPAEEGKTQEEENEIEAAKK
AKRALNRFNGMSVAEVMAKTLPDVISYNLDILIIGINPGLLSAFKGRHYPNPGNHFWKCL
FLSGLTDEQLNYMHDQSLPEKYSIGFTNMVERTTPGSKDLSSKEIREGGRQLLDKLQKYK
PLIAAFNGKGIYEIFCKETFGVKAKNLDFGLQPYKIPETETVCYLMPSSSPRCAQFPRAQ
DKVHFYIKLKELRDQMKGRAPRPEVEETEYSFNLQLAKEDAKRMAIKEEQVDPDYESCSG
LHGDAKQNSNSSY
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtattcaaataagtcaacagttaagatggaagaaaaccagtatacatcattg
acggttcctacggattattttcagcagtggtaccaatccagccagcagcacccagaggcg
cagtatgtgatgccgtatcataacacgggccattacacagaaggtcccagagatgagctt
gtcatggccgagctgtcggtccaccgcgaaccacctgtttaccaagaacctttttaccag
aactataaccccccggcccaaaatcactaccaggatctgacctaccagtcaaacgtcagg
gagcagcagcagcagcagcagcagcagcagcagcagcagcatcctcctgctcacccgcac
cacactcaacaccaacatacaatacagcagcaggagccgaatgttcagccccaacctcag
cctgctggtcaacctcaagttgtgacaccggtaaagaagaagagaggccggcctcctaag
cagccggcggaggagggcaagacacaagaggaggagaatgagattgaggcggcaaaaaaa
gccaagagggctctcaaccgcttcaacggcatgtcagtggctgaggttatggccaaaacc
ctgccagacgttatatcctacaatcttgacattttgattattggaattaacccaggacta
ttatctgccttcaaaggacgccattatccaaacccaggaaaccatttctggaaatgtctg
tttctttctggtttaactgacgagcagctcaactacatgcatgaccaaagcctgccggag
aaatatagcatcggctttaccaacatggtagagaggaccacacctggcagcaaggacctc
tctagtaaggagattcgtgaaggaggtcgacagttacttgacaaactgcagaaatacaaa
ccattaatagcagcttttaatggaaaaggtatttatgaaatcttctgcaaagaaaccttt
ggtgtgaaggcaaagaatctcgactttggtctacagccttacaaaatcccagaaactgaa
acggtgtgctacttgatgccgtcatcaagcccccgctgtgcccagtttccgcgtgcccag
gataaggttcatttctacatcaagctgaaggaactgcgagaccagatgaaaggccgggcg
ccaaggcccgaggttgaagagacagagtactcgttcaatctgcagctagctaaagaggat
gctaagaggatggcaatcaaagaagagcaggtggatccagactatgaaagctgtagtggg
ctgcatggggatgcaaagcaaaacagcaactcctcctactaa
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