Etheostoma cragini (Arkansas darter): 117950862
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Entry
117950862 CDS
T07493
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
ecra04520
Adherens junction
ecra04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117950862 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117950862 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117950862 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecra01009
]
117950862 (ptprfa)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117950862 (ptprfa)
Protein phosphatases and associated proteins [BR:
ecra01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117950862 (ptprfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Tc-R-P
Interfer-bind
PTP-SAK
V-set
DSPc
Fn3_VIN3
Y_phosphatase3
PTPlike_phytase
PTP-NADK
C2-set_2
Ig_C17orf99
Fn3_PTPRU
Fn3_ELFN
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117950862
NCBI-ProteinID:
XP_034738117
LinkDB
All DBs
Position
9:26955444..27317847
Genome browser
AA seq
1932 aa
AA seq
DB search
MDLRFRRLSPLAEGALHLVLLAGLVLPSHAESMPSFIKSPDDQTGISGGVASFVCQAVGE
PKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSAGEINTS
AKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEIYWFKDFLPVDIGS
SNGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRDQREVRR
VPPRFSIPPTNHEVMPGGSVNLTCVAVGAPMPYVKWMTGEVELTREEEMPIGRNVLELTN
IRQSGNYTCVAISSLGMIETTAQIIVKALPKPPTSLTVTETTATSVTLTWDSGNPEPVSY
YVIQYRAKLSDNGFQEVDGVATTRYSIGGLSPFSEYEFRVMAVNNVGRGPPSGIVDTRTS
EQAPSSPPLHIQARMLSSSTMLVQWEPPEEPNGQIRGYRVYYSLEHDAPLSAWQKHNTDD
SQLTTISGLTTDITYSLRVLGFTSVGDGPPSDVLQIKTQQGVPAQPSGFEAEAELDSRIM
LSWLWPVQDPIISFELLYWEDSTPTDKHHETFDPAGSHAVDGLKPDTLYMFSLAARSEIG
LGVFTQPIEARTAQSTPSAPPQDVRLLSLSSTSIKVSWVAPPTDSRHGELVRYSLAYQAL
TGEDVTRHQVSGIGADVTSYVLDDLQKWTEYLVWVRAHTDVGPGPESSAARIRTREDVPG
APPRKVEVEALNSTALQVSWKPPLSVKQHGQIRGYQLVYSRLENGQPHGQPVIIDVSFPE
AQWTDEDSTNYEAIVTGLLPETSYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMMIS
TTIGNTALIQWQPPKEMVGEHVGYQLQYKRVEEEAFTIKDFRKSDDHFTVTGLHKGATYI
FKLCGKNRAGNGEEYVKEISTPEDIPSSYPQNLSVVGLTATSTKLAWEPPPLPERNGKIV
KYVVVYRDINSQHNNTNSTAETQMTVQGLQPDTTYDIRVQAFTSKGGGPISPSIQSRTMS
TSMPDLPSVFTKNFGVKAVMKTSVLLTWEVPETYKSQVPLKILYNQQSVEVQGNLKRKLI
TELQPDTDYSFVLMSRGNSAGGLQQQVSIRTAPDLLKMKPAPYQHDVEEGGRVTISLSRA
PAEAHIRWYYIVVVPVTPVSPRRWENPEDMDIHELLEPDSSLQGEESPSQDVLQPYIAAK
MDALPEIFTLGDEKKYNGYYNKPLPGQKQYRCFVLADLMNHESQRTFAASPFSDPIMVKL
HSGMARQTEDSEMLWVMGPVLAVILIIIIVIAILLFKSKQERKRTSPAKDEHMAGVKDSL
LAHSSDPVEMRRLNYQTQGSSGLSCPNTPRMREHPPIAVCDLADYIERLKANDGLRFSQE
YESIDPGQQFTWEHSNLEVSKPKNRYANVIAYDHSRVILTPVDGVPGSDYINANYIDGYR
KQNAYIATQGPLPETLSDFWRMVWEQRTCTIVMMTRLEEKSRVKCDQYWPSRGTETYGMI
QVTMLDTVELATYSIRTFTLYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRRVKA
CNPPDAGPMVVHCSAGVGRTGCLIVIEAMLERMKHEKSVDVYGHVTCMRAQRNYMVQTED
QYIFIHEALLEAATCGNTEVPARNLYAHIQKLTQIPPGESVTAMELEFKKLASSKAHTSR
FISANLPCNKFKNRLVNIMPFESTRVCLQPIRGVEGSDYINASFIDGYRQQKAYMATQGP
LAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMP
QYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPI
TVHCSAGVGRTGVFITLSIVLERMRYEGAVDLFHTVKTLRTQRPAMVQTEDQYQLCYRAA
LEYLGSFDHYAT
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggaccttagattcagacggctgtcgcctctcgccgagggagctcttcatctggtgttg
ctggccgggctggtgctgccgtctcacgcagagagcatgcccagtttcatcaagtccccc
gacgatcagacagggatttcgggaggagtggcatcgtttgtatgccaggcagtgggtgag
cccaaacctcgcatcacctggatgaagaaggggaagaaagtcagctcccagcgctttgag
gtgattgagtttgatgacggctcgggctcggtgctgcgcatccagcctctgaggacccac
cgcgacgaggccatctacgagtgcacagccaccaacagcgcgggagagatcaacaccagc
gccaagctcaccgtgttagaggaggaccagatccctcatggtttccccaccatagacatg
gggccccagctgaaggttgtggagagaacgcgcactgctacgatgctgtgcgcagccagc
ggcaaccctgacccggagatctactggttcaaagacttcctgcctgttgacatcggcagc
agtaacgggcgcataaaacagctgcgatcaggtggtacaccaatcagaggagcgcttcag
attgagaacagcgaggagtcggaccagggaaaatacgagtgtgtggcagtcaacagcgcc
gggactcgctactctgctccggcgaacctttatgtccgagatcaacgggaagttcgccgt
gtgcctccccgtttctccatcccccccaccaatcacgaggtgatgcccggcggcagcgtc
aacctgacctgcgtcgcggttggcgctcccatgccttacgtcaagtggatgactggcgag
gtggagctgacccgggaggaggagatgcctattggccgcaacgtcctggagctcaccaac
atccggcagtctggaaactacacctgtgtggccatatcgtccctgggcatgatcgagacc
acggcccagatcattgtcaaagccctgcccaagccacccacttccctcactgtgacagaa
acaacggctaccagtgtcactctgacctgggactctggcaacccagaaccggtatcctac
tatgtgatccagtaccgggcaaaactgtctgacaatggcttccaggaagtagatggggta
gccacaacccgatacagcattgggggcctcagccccttctcagaatatgagtttcgtgtc
atggcagtcaacaacgtgggcagggggcctcccagcggtattgtagacacccgaacaagt
gagcaagccccctcatcaccgcctcttcacatccaggcgcggatgctgagctccagcacc
atgctggtccagtgggagcctccggaggagcccaacggtcaaatccggggctaccgggtc
tattacagcttggaacatgacgccccgctcagcgcctggcagaaacacaacacagatgac
agccagctcaccaccatctcaggcctgaccacagatatcacctacagcctcagggtactg
ggcttcacctctgtgggggatgggccgccttctgatgtgctgcagatcaagacccagcag
ggagttccagctcagccgtctggttttgaggctgaggccgagttggactcgcgcatcatg
ctgtcctggctttggcctgtccaagaccccatcattagctttgaactgctctactgggag
gacagcactcctacagacaagcatcatgagacgtttgacccagcgggctcccatgcagtt
gatggtctaaagccagacacactctacatgttttccctggcggcaagatcagagattggt
ttaggagtctttactcagccaattgaggccaggacggcccagtccaccccctcggcccct
ccccaggatgtacgcttgctaagcctcagctccacaagcatcaaggtgagttgggtggcg
ccgcccacagacagccgccacggggagctagtgcgctactccctggcctaccaagcactc
acaggggaggacgtgacgcgccaccaggtgtcaggaatcggtgctgatgtcaccagctat
gtgctggacgaccttcagaagtggactgagtatttggtgtgggtcagggctcacactgac
gtcgggcctggcccggagagctcggcagcccgcatcagaaccagggaagacgtgcctgga
gctccacccaggaaggtggaggttgaagccctcaactccactgccctccaggtgagctgg
aagccccccctttctgtgaagcagcatggccagattcgaggctatcagctggtttactcc
cggctggaaaacggacaacctcacggccagccagtcatcattgacgtttcctttcctgaa
gcccagtggactgatgaggattcaacgaactacgaggccatagtaacaggtctgctccca
gagacaagctactctgtgactgtggccgcgtacaccaccaagggcgatggagctcgcagc
aaagccaaagtggtcaccaccacaggagcagtgcctggcaagcccactatgatgatcagc
accacaatagggaacaccgctctgatccagtggcagccgccaaaagagatggtgggggag
catgtgggataccagttgcagtacaagagagtagaggaggaagctttcaccatcaaagac
ttccgaaagtcagacgatcacttcacagtcaccggcctccacaagggagccacctacatc
ttcaaactgtgcggcaaaaacagagccggcaacggggaggaatatgtgaaggagatcagc
acccctgaggacattcccagcagctacccccagaatctgagcgtggtaggcctgaccgcc
acctccaccaagctggcctgggagcccccgccgctgcccgagagaaacggaaagattgtc
aagtacgtggtggtgtaccgagatatcaacagccaacacaacaacaccaacagcaccgcg
gaaacacagatgaccgtccaaggtttgcagccggacacaacctacgacatcagagtccaa
gctttcaccagcaagggggggggaccaatcagccccagcattcagagtcgaaccatgtcc
acgtccatgccagaccttccctcagtgttcaccaagaactttggtgtgaaggctgtgatg
aaaacatctgtcctgttgacctgggaagtgccagaaacctacaaatcccaagtgcctctc
aagatcctgtacaaccagcagagtgtggaagtccaaggcaatctgaagaggaagctgatc
acagagctgcagccggatacggattattccttcgtgctaatgagccggggaaacagtgcc
ggcggcctccagcagcaggtttccatcagaacagctccggatctgctgaaaatgaaacca
gctccataccaacacgatgtggaggaggggggtagagtgaccatcagtctgtccagggcg
cctgctgaagcccacatcaggtggtactacatagtggttgtccctgtcaccccggtttct
ccgagaagatgggagaaccctgaagacatggacatacatgagctcttggagcccgacagc
agtctgcagggagaggagagtccgagccaggacgtcctgcagccctacatcgctgccaag
atggacgctctgcccgagatcttcacactgggtgatgagaagaaatacaacggctactac
aacaaacccctcccgggccagaagcagtaccgctgctttgttctggcagacctgatgaac
cacgagtctcagaggacttttgcagccagcccgttctctgatcccatcatggtgaagctc
cacagtgggatggcccgacaaaccgaggactctgagatgctgtgggtgatgggtcccgtg
ctggcagtcattctcatcatcattatagtcattgctattcttctcttcaagagcaaacaa
gaaaggaaacgaacatctccagccaaggatgagcacatggcgggggtcaaggactcactg
ttggcccactcctcagaccctgtggagatgaggagactcaactatcaaacacaaggttcc
agtggcctcagttgcccgaatactccaaggatgagggaacatcctcccatcgccgtctgt
gacctggcggactacatagagagactcaaggccaatgacggtcttcgcttctctcaggag
tacgagtctattgatccaggacagcagttcacctgggagcactccaaccttgaagtcagc
aagccgaagaaccgctatgcaaacgttatcgcctacgaccactccagggtcatcctcaca
cctgtggatggagttccaggaagcgactacatcaacgccaactacattgacggctacagg
aagcagaatgcttacatcgccacacaggggccgctgcccgagacgctcagcgacttctgg
aggatggtgtgggagcagaggacatgcaccatcgtgatgatgacccgtctggaggagaag
tcacgggtgaaatgtgaccagtactggcccagtcgaggaacagagacatatgggatgatc
caggtgaccatgctggacactgtggagctggctacgtacagcattcgcacattcaccctc
tataagaatggctcaagtgagaagagagaggttcgacagttccagttcatggcctggcct
gatcatggagtgcctgagtaccccaccccaatactggcctttctacgcagagtcaaggcc
tgtaatcctccagacgctggacccatggtggtccactgcagtgccggcgtgggtcgaaca
ggctgcctcattgtgatcgaagccatgctggagaggatgaaacacgagaagtcggtggac
gtttacggtcatgtgacatgtatgcgcgctcagaggaactacatggtgcaaacagaagat
cagtacatattcatccacgaggccctgctggaagctgcaacatgtggcaacacagaagtc
cctgcccggaacctgtacgcccacatccagaagctcacccagatccctcccggagagagt
gtcaccgccatggaactggaatttaagaaactggccagctctaaagcacatacctcaaga
ttcatcagtgccaacctgccgtgtaacaaattcaagaaccgcctggtgaacatcatgcct
ttcgagtccacccgtgtctgcctgcagccaatcagaggggtggagggctccgactacatc
aacgccagcttcatcgacggatacaggcagcagaaagcatacatggccacccagggcccg
ttagccgagaccactgaggacttctggagaatgttgtgggaacacaactccaccattgta
gtcatgctcaccaaactccgcgagatgggacgggaaaaatgccatcagtactggcctgct
gagcgctccgcacgctaccagtactttgttgtggaccccatggctgagtacaacatgcct
cagtacatcctgagagagttcaaagtcacagacgccagggatgggcagtcgaggaccatc
aggcagtttcagttcactgactggccagagcaaggagtgccaaaaactggggagggattc
atcgatttcatcggccaagtccataaaactaaagagcaatttggacaagatggaccaatt
actgtgcactgcagtgccggtgttgggcggaccggtgtgttcattaccctgagcatcgtc
ttggagaggatgagatacgagggagcggtggacctgttccacaccgtcaagacgctccga
actcagaggccagccatggtgcagacagaggaccagtaccaactgtgctaccgagctgct
ctggagtaccttggaagctttgatcactatgcaacataa
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integrated database retrieval system
