Etheostoma cragini (Arkansas darter): 117951210
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Entry
117951210 CDS
T07493
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04010
MAPK signaling pathway
ecra04020
Calcium signaling pathway
ecra04510
Focal adhesion
ecra04540
Gap junction
ecra04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117951210 (pdgfrb)
04020 Calcium signaling pathway
117951210 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117951210 (pdgfrb)
04540 Gap junction
117951210 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117951210 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ecra01001
]
117951210 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ecra04090
]
117951210 (pdgfrb)
Enzymes [BR:
ecra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
117951210 (pdgfrb)
Protein kinases [BR:
ecra01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
117951210 (pdgfrb)
CD molecules [BR:
ecra04090
]
Proteins
117951210 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Adeno_E3_CR1
RIFIN
PPC
VEGFR1-3_N_Ig-like
C2-set_3
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
Haspin_kinase
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
117951210
NCBI-ProteinID:
XP_034738708
LinkDB
All DBs
Position
10:complement(14738177..14764212)
Genome browser
AA seq
1102 aa
AA seq
DB search
MRRVTASTFHLTVIVTALLYFCNELCCLEITPDVKELVLAEGSSLILTCSGSEDTTWEFK
RDDVPYFQLEVQHGGQSYQIVQSSITSSVLTLLNVSWKHTGVYQCVDQHTGETKEVAVFV
PDPDVWFVVSAHGMVTKTSEWSTVPCVVTNPNITVTLYERDTDLPITGLYVPSEGYKARL
EDRAYVCRGELNNEVKESQAFNVFSIVVPEAIDAYINASKTVLKQGEPLTVNCTVHGVML
VFFSWDIPNRKDVEVEPLTDILSNMKMRSCLIFPQTTVAHSGNYVCNVHEPVQDQAAMAS
INITVLEQGFVEVKPDQQQNISAKLQENVELRVEIEAYPPPKVHWRKDGAAIKGDKTITT
RQEHEISYVTTLTLVRVRTEQKGLYTVLVTNGDDTKEVTFDLEVQVPSQIKDLTDHHLPG
KRHLVTCVAEGVPAPTIQWYSCDSMHKCSNQTAAWQPLTLEPEVLSIRTNVSYSEIRKTS
QVMSQVTFHKPQQVTLRCETSNQAGLLDRRDVKLVSSTLYSQVAVLAAVLALVVIIIISI
IILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLAWEMQRDNLVLGRTLGSG
AFGRVVEATAYGLTHSQSSIKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLG
ACTKNGPLYLVTEYCRYGDLVDYLHRNKHTLLQYYAEKNQDDGYLISGGSTPLSQRKGYV
SFGSESDGGYMDMSKDEPTFYVPMQEQMDSIKYADIQPSPYESPYQQDIYQEQGGGGLDL
AISDSSVLTYDDLLGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARD
IMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMN
ELFYSALKRGYRMAKPTHASDEVYDIMKKCWDERFEKRPDFSFLVHSVGNMLTDSYKKQY
SQVNDNFLKSDHPAVARTKPRLSSPFPITNPAFGSPSPFYMPPDPYSQSPSPAEFRQEAD
TQEVLTSYNEYIIPIPDPKPEDVFTHKPSESPASSLALEEETDSMSQDTADTLPEEDRLE
ETSERDALLGSAGMPEVEDSFL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggtgacggcatccacgttccatctaacggtcatagttacagctcttctgtat
ttctgcaatgagctctgctgtctggagatcacacccgatgtcaaagagctggtcctggct
gagggctcctcgctcatcctcacctgctccggctcagaggacacgacgtgggagttcaag
agggacgatgtgccctacttccaactggaagttcaacatggtggtcaaagctaccaaatt
gtgcaaagcagcatcacatccagtgttttgaccttgttgaacgtgagctggaagcacaca
ggggtgtatcagtgcgttgatcaacacactggagaaactaaggaggtggctgtttttgtc
ccagaccctgatgtgtggttcgtggtgagcgcccacggcatggtaacaaagaccagcgag
tggagcaccgtcccctgtgtggtcaccaaccccaacatcactgtcaccctgtatgagagg
gacactgatctgcccatcacgggactttatgttccaagtgaggggtacaaggcacggctg
gaggacagggcctatgtgtgccggggagaactgaacaatgaggtgaaagagtctcaggcc
ttcaacgtcttcagcattgttgtcccagaggccatcgacgcctacatcaatgcatcaaag
accgtcctgaagcagggcgagccgctgacagtaaactgcacagtgcacggagttatgctt
gtgtttttttcctgggatatccccaatagaaaggatgtagaggttgagccgctaacagac
atcctgtccaacatgaaaatgcgctcctgcctgatctttcctcaaaccacagtggcccac
agcggaaactacgtctgcaatgtccatgagcctgtccaagaccaggctgccatggccagc
atcaacatcaccgtgctcgagcaaggctttgtggaggtgaagcctgatcagcaacaaaat
atttcagccaagctgcaagagaacgtggagctgagagtggagattgaagcctaccccccc
cctaaggtccactggagaaaagatggcgccgccatcaaaggagacaaaaccatcacaacc
agacaagagcatgagatcagttatgtcactactctcaccttggtgagggtgaggacggag
cagaagggtctctacactgtcctcgtcactaacggagatgacacaaaggaagtaaccttt
gacttggaagtccaagttccttctcagattaaagacttgactgaccaccacctccctggg
aagagacacttggtgacctgtgtagctgagggggtcccagccccaaccatccagtggtac
agctgtgacagcatgcacaagtgtagcaaccagacagcggcgtggcagccgctgacacta
gagccagaggtgctgagcatccgcaccaatgtcagctacagcgagattcgtaaaaccagc
caggtgatgagccaggtgacctttcacaagccccagcaggtcacattgcgctgtgagacc
agcaaccaagcaggactccttgacagaagagacgtcaaactggtgtccagcaccctgtac
tcccaggtggcagtattggctgctgttttagccttggtggtcatcattatcatatctatc
atcatcctcattgctgtatggaggaagaaacctcgatatgagatccgatggaaggtgata
gagtctgtgagccaggacggtcatgagtacatctatgtggacccgatccacctgccctat
gacctggcctgggaaatgcagcgagacaacctggtgctgggtcgcactcttggatcagga
gcctttggcagggtggtcgaggcaactgcctacggtctcactcattcccagtccagcata
aaagtggccgtgaaaatgctgaaatctacagccaggagaagtgagactcaggctctgatg
tcagagttgaagatcatgagtcacctgggccctcacctcaacattgttaacttgcttgga
gcttgcaccaaaaatggccctctgtacctggtgacagagtactgtcgctatggcgacctg
gtggactacctgcacaggaacaagcacaccctcctgcagtactacgctgagaagaaccaa
gacgatggctacctcatctcgggaggaagcactccgctcagccagaggaaaggttacgtg
tcctttggaagtgagagtgatggaggatacatggacatgagtaaagacgagcccaccttc
tacgtgcctatgcaggagcagatggacagcatcaagtatgcagacatccaaccttctcca
tacgagtctccctaccagcaggacatctatcaggaacaaggtggcggcgggttggacctg
gccatcagtgactcttctgttctcacctatgatgatctgttgggcttcagctaccaagtg
gcgaaggggatggagttccttgcttcaaagaattgcgtccatcgggacctcgctgccagg
aatgtgttgatctgtgaggggaagctggtgaagatctgtgactttggcctggccagagac
atcatgcatgattccaactacatctccaaaggcagcactttcctgcccctgaagtggatg
gcaccagaaagtattttccataatttgtacaccaccctgagcgatgtgtggtcatacggc
attcttctatgggagatttttacattgggaggaaccccctaccctgatttgcccatgaat
gagttgttctacagcgctttgaagagaggctaccgaatggctaaacccacccacgcctct
gatgaagtttacgacatcatgaagaagtgttgggacgagaggtttgagaaaaggcctgat
ttctcgtttctggtccacagtgtggggaatatgttgacagacagctataaaaagcaatac
agccaagtcaacgacaacttcctgaagagtgaccacccggcagttgcccgcaccaaaccc
agactctcctcaccctttccgatcaccaacccagcatttggctccccatcccccttctac
atgcccccggacccctacagccagagcccgagccccgcggagttcagacaagaggcagac
acacaggaagtcctaacttcatacaatgaatacatcattcccatcccagaccccaagccg
gaggacgttttcacccataagccatcggaaagccctgcaagctctctggctctggaggag
gagaccgactcaatgtcgcaggacactgctgacacgctcccagaagaggacaggttagag
gagaccagcgagagagatgctctgctgggctccgccgggatgcccgaggtagaagacagc
ttcttgtag
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