Etheostoma cragini (Arkansas darter): 117951346
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Entry
117951346 CDS
T07493
Symbol
ldlrb
Name
(RefSeq) low-density lipoprotein receptor isoform X1
KO
K12473
low-density lipoprotein receptor
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03272
Virion - Hepatitis viruses
ecra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117951346 (ldlrb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117951346 (ldlrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117951346 (ldlrb)
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
117951346 (ldlrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
EGF
hEGF
Psg1
TMEM154
Motif
Other DBs
NCBI-GeneID:
117951346
NCBI-ProteinID:
XP_034738917
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Position
2:17810397..17824091
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AA seq
875 aa
AA seq
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MFGMWKGLTALSTCCCLLMLIHFSLQADAALTCSSTQFKCGNGRCITRKWICDGTDDCGD
GTDELLATCTTKTCLPSEFNCGAPTNQCIPGGWHCDGKAECNNGADEKNCTAKQCRAGEF
RCANGQCLSPTFVCDDDDDCSDGSDEASCQKRKCSSHSFQCNNSVCVPARWSCDGDQDCA
DGSDEWPQNCVGRQPQMTAVHCSVHEFQCGNGECIHSSWRCDGGIDCQDRSDEVNCSRPT
CLPDEFQCNDGACIHGSHQCDKEPNCRDLSDEIGCNIVNVCEGPTKFKCHSGECISMEKV
CDKKKDCRDWSDEPVKECNNNECLIGRGGCSHFCNDLKIGYNCSCPAGYSLHMDKKTCED
IDECAEPDTCSQICINLPGSYKCDCEMGYEINPVSKTCKAESGTVPTLYFTNRHEVRTMT
VDRKEYVRLIPQLKNVVALDIDMPNKMIFWSDLSLKKIYSSKIDVAGNSSYHTVVIGSGI
EAPEGIAVDWNHGNIYWTDSVLKTISVATTDGSKRKTLISNNLEKPRAITVDPVNNFMYW
TDWGDEAKIEKSGLNGAGRLALVTDNIVWPNGITLDMVNQRLYWVDSKMHTLSSIDVNGG
TRHSLIFSEEKLSHPLSLTVFEEKVFWTDMTNSAVFSANRLSGKDITQLATNLVQPEDIV
VYHNLKQPNGTNWCRESNSMNGGCEFLCLPAPLVNQHSPKYTCACPDHMAMGADMRKCVT
AVSVAPPAENKTGAPLAPKAPTKHATPRLPVPTTTTTTTTRANEKLSTTSSSQQTTEEPA
ATAQGKRLAAFPKEAPSSHPIALYVVLPILVMSLLIFGAVFLWRNWRLKNTNTIHFDNPV
YQKTTEDELHICRTSSEGYVYPQRQMLSMEDVDVA
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatgtggaagggactcaccgcgctgtccacatgttgctgtctgttgatgctg
attcatttttcgctccaagcagatgcagccctcacatgcagctccactcagttcaagtgt
ggaaatgggaggtgcattaccaggaagtggatttgtgatggcaccgacgactgtggtgat
ggaactgatgaactgctcgcaacatgtacaaccaaaacatgtctgccgtcggagttcaat
tgcggcgcacccaccaaccagtgtataccaggaggctggcactgtgacggcaaagctgaa
tgtaacaacggcgctgacgagaaaaactgcaccgccaaacaatgcagagctggcgagttc
cgctgcgccaatggccagtgtttatcccccaccttcgtttgcgacgacgacgacgactgt
tcagacggctcagatgaggcttcctgccaaaagcgcaaatgcagctctcattcctttcag
tgtaacaactcagtgtgtgtgccggcccggtggagctgcgacggagaccaggactgtgcc
gatgggtcggatgagtggccgcagaactgtgtgggacggcagccgcagatgacagctgtg
cactgcagcgtccacgaattccagtgtggaaatggggagtgtatccacagcagctggagg
tgtgacggaggcattgactgccaggatcgatcagacgaggtcaactgcagtcgtcctaca
tgtcttccagatgagttccagtgtaatgacggtgcctgtatccatggcagccaccaatgt
gacaaagagcccaactgcagggacctcagtgatgagattggctgcaacatagtaaatgtg
tgtgaaggccccaccaagttcaagtgtcacagtggggagtgtatcagcatggagaaagtg
tgcgacaaaaagaaagactgtagggactggtctgatgaacctgtcaaagaatgcaacaac
aacgagtgtttgattggacgtggtggatgctcccatttctgcaacgacctgaagattggc
tacaactgctcctgccctgctggatacagcctgcatatggacaagaaaacctgtgaagac
attgatgaatgcgctgagccggatacttgcagtcagatctgcatcaacctgcccggcagc
tacaagtgtgattgtgagatgggttatgaaatcaaccctgtgagcaagacatgcaaggct
gaatcaggcactgtacccaccctctacttcaccaatagacacgaggtgaggacaatgacg
gtggaccgcaaggagtacgtccgtctgatcccccagctgaagaatgtggtggctttggac
attgacatgcctaacaagatgatcttctggtctgacctatctctgaagaaaatctacagc
tccaagatagacgtggccggtaactcctcttaccatactgtagtaattggcagtgggatt
gaggccccagagggcattgcggtggattggaaccatggcaacatctactggactgatagc
gttttgaagactatctctgtggcaacgacagatggcagtaagcggaaaaccctgatctca
aataacctggagaagccaagagccatcacagtcgaccctgtaaataactttatgtactgg
acagattggggtgacgaggccaagatagagaagagtgggttgaatggagcgggtcgcctt
gccttggtaacagataacattgtgtggcccaatggcatcaccctggacatggtcaaccag
cgtctctactgggtggactccaagatgcacactctgtccagcattgatgtgaatgggggg
acacgacacagcctcatttttagcgaggaaaagctctctcatcccctgtctctgactgtc
tttgaggagaaagtgttttggacagacatgaccaacagtgctgtttttagtgccaaccgc
ctgtcgggaaaagacatcactcagctggcgacgaacctagtccagcctgaggacatcgta
gtgtaccacaacctcaagcagccaaatggtacaaactggtgcagagagagtaacagtatg
aatggaggatgtgagtttctgtgcctccctgcccctcttgtcaaccagcactctcctaaa
tacacctgcgcctgtcctgaccacatggccatgggagctgacatgaggaaatgtgtgaca
gcagtctcagttgcccctcctgctgaaaacaaaaccggtgcaccgctcgcacccaaagct
cccaccaagcatgctacacccaggctgcctgtccccaccactactaccactacaaccacc
agagccaacgaaaaactctcaactacctcatctagccagcagaccacagaggagcctgct
gccactgctcaaggtaaaagattggcagcctttcccaaagaagccccttcatcccaccct
attgctctctacgttgtgttgccgatactggttatgtccctactgatctttggagcagtg
tttctttggagaaactggcgtttgaagaacaccaacaccatccactttgacaatccagtg
taccagaaaaccacagaggatgagctacacatctgcaggaccagctctgagggctacgtt
taccctcagaggcaaatgctaagcatggaggatgtggatgttgcgtga
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