KEGG   Etheostoma cragini (Arkansas darter): 117951831
Entry
117951831         CDS       T07493                                 
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
  KO
K04389  tumor necrosis factor ligand superfamily member 6
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra04010  MAPK signaling pathway
ecra04060  Cytokine-cytokine receptor interaction
ecra04068  FoxO signaling pathway
ecra04210  Apoptosis
ecra04217  Necroptosis
ecra05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117951831 (cd40lg)
   04068 FoxO signaling pathway
    117951831 (cd40lg)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    117951831 (cd40lg)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    117951831 (cd40lg)
   04217 Necroptosis
    117951831 (cd40lg)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    117951831 (cd40lg)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecra04147]
    117951831 (cd40lg)
   04052 Cytokines and neuropeptides [BR:ecra04052]
    117951831 (cd40lg)
   04090 CD molecules [BR:ecra04090]
    117951831 (cd40lg)
Exosome [BR:ecra04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117951831 (cd40lg)
Cytokines and neuropeptides [BR:ecra04052]
 Cytokines
  Tumor necrosis fators
   117951831 (cd40lg)
CD molecules [BR:ecra04090]
 Proteins
  117951831 (cd40lg)
SSDB
Motif
Pfam: TNF SKA2
Other DBs
NCBI-GeneID: 117951831
NCBI-ProteinID: XP_034739669
LinkDB
Position
10:complement(19276742..19279494)
AA seq 235 aa
MINTYQTSLAPPPVPPRLGASQPVLIPAPLPSRGHSKSLVRFLLGVVMLHLFLSVAGFLY
LYHNDKMLSSQHPSGKENFAFISAEKKETSDKALARMVVTQNLHKSTQTSELGYFQWDMS
HSILRNIRPYYSSWLTILQPGDYYVYSRVTFSKGDSTRALVSTVKLRDNETGKEKVVMQA
YCNLNVNNPSIPQLCTATQGELITLERGNQLSLWVQDLSLVNYEDGATTFGMYKL
NT seq 708 nt   +upstreamnt  +downstreamnt
atgatcaacacttaccagaccagcctggctccaccgccggtgcctccgcgcctcggcgcg
tcccagccggtcctcatcccggctccacttccatcacgaggccacagcaagtctctcgtc
cggtttttgcttggtgtagtgatgctgcatttatttctgtcggtcgcaggattcctctat
ctgtaccacaatgacaaaatgctttcatctcagcatccctcaggtaaagaaaattttgct
tttatctcagcagaaaagaaggaaacttccgacaaagccttggcacggatggtagttacg
cagaatttacacaaatcaactcaaacatctgaactgggttatttccagtgggatatgagc
cactcaattcttaggaacatcagaccctactacagcagctggctgactatcctgcagcct
ggcgactactacgtttactccagggtgaccttctccaaaggcgactctacgcgcgcactg
gtcagcacggtgaagctgagggataatgagacaggaaaggagaaggttgtgatgcaagcc
tactgcaacctgaacgtcaacaatccatccatccctcaactgtgcacggccacacaggga
gagttgatcacactggagagaggaaaccagctaagcctttgggtacaagacctttcactg
gtgaactatgaggatggagcaacaacctttgggatgtacaaactgtag

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