Etheostoma cragini (Arkansas darter): 117952605
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Entry
117952605 CDS
T07493
Symbol
rapgef4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04081
Hormone signaling
ecra04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117952605 (rapgef4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117952605 (rapgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117952605 (rapgef4)
Membrane trafficking [BR:
ecra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117952605 (rapgef4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Vit_b-sht_shell
RA
Mis12
Motif
Other DBs
NCBI-GeneID:
117952605
NCBI-ProteinID:
XP_034740914
LinkDB
All DBs
Position
11:complement(14777113..14808064)
Genome browser
AA seq
1024 aa
AA seq
DB search
MVAAHTSSHSSESAEWIICLDKRPAERSGEDVEIILARLKNMKVFERFHPSLLQQICMCG
FYECLEKGITLYRQGDIGTSWYAVLSGSLDVKVSVTASYQHADTICTLGTGTAFGESILD
NTPRHATIVTQEFSELLRIEQREFRSLWEKYHKCMAGLLSPPYGVMDSGCSGDRMLEKEN
ICDNSLVSVSKLPNKKSFIESPAKSHLKCISQVPSEKILHAGKILRNAILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWQMQQSSCIHSRIQAVGMWQVLLEEGVLNHVDQELSFQDKYL
FYRFLDDEQEDASLPDEEERKESQEELQDTLLLLSQIGPDAHMRMILSKHPSERTADDLE
IIYEELLHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFSQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVNKEDFNRILRDVEANTV
RLKEHGQDVLVLEKSLGSSRTSNHGASSSHYKYKVMSGTPEKILEHLLEMMRLDSLFTES
DSALDDYVLMHCVFIPNSQLCPVLMAHYHALASQGSEQEKLDYTLNNKRRVIRLVMQWAA
VHGDHLQEEDSSVAFLKEFLMAVSNDAKAIPDLRDQLTELERSVKRNTEEARVSQKKHKV
LLRQFSMGDEKLQKRQPIKSNDEILLKVYCCDHTYTTIRVPVAASVREVIGAVADKLGSA
EDLLLVNLSSTGEKVIFKPNDVSVFSTLSINGRLFASRRDQLDSLTPLPEQEGSSTGLLA
GFELMSSKDVAYHMTSYDWELFHCVHELELIYHTFGRQNVKKTTVNLDLFLRRFNEIQFW
VITEMCLCSQLNKRVQLLKKFIKIAAHCKEYRNLNAFFAIIMGLSNPAVCRLRQTWEKLP
NKFKKFYSEFENFMDPSRNHRAYRLTVAKLEPPIIPFMPLLIKDMTFTHEGNKTFIDYLV
NFEKMRMIANTVKIVRYCRSQPFSPDSPLASKNPEVRTYVRQLNVIDNQRTLSQLSHGLE
PRRS
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtagcagctcacacttcttcacattcgtcggaatctgccgagtggattatttgtctg
gataagagaccagcagagcgctctggagaagatgttgaaataattctggcacgtctaaaa
aatatgaaggtcttcgagagattccaccccagtttgctgcagcagatttgcatgtgtgga
ttctatgagtgcttggagaaaggcatcaccttgtatcgccaaggagacattggcaccagc
tggtatgccgtcctctctggttcactggatgtcaaagtttcagtgacagcaagttatcag
catgctgatactatatgcacgctgggcactgggacagcatttggggagtcaattctggat
aacaccccccggcatgccaccattgtcacacaggaattcagtgagctcctacgcattgag
cagagggagttcaggtctctgtgggagaaatatcataagtgcatggctggcctgctctcc
ccaccctatggtgtgatggacagcggatgtagtggtgacagaatgctggaaaaagagaac
atatgtgacaactcattggtttcagtctccaaacttccgaacaagaagtcattcattgaa
agtccagccaaatctcaccttaaatgcatttctcaggtcccgtctgagaagatcctgcat
gcggggaagattctccgtaacgccatcctctccagggcgcctcacatgatcagagacaga
aagtaccatttgaagacatacaggcagtgttgcgtggggacagagttggttgactggcaa
atgcagcagagctcatgcatccactctcgtattcaggctgtgggcatgtggcaggtgctg
ctggaagaaggtgttctcaaccatgtggaccaggagctgagcttccaggacaagtacctt
ttctaccgcttcctggatgacgagcaggaggatgctagtttacccgacgaggaggagagg
aaagaaagccaagaggagctgcaggacactctgcttcttctctcacagattggacctgac
gcccacatgaggatgattctgagcaaacatccctctgaaagaacagcagatgatttggag
atcatttatgaagagctgctccatataaaagccttatctcacctatccaccactgtgaag
agagaactggcaggagtgctgatctttgagtctcatgcaaaggcaggaaccgtgttgttc
agtcagggggaggagggcacatcatggtacattattttgaagggctcagtcaacgttgtc
atctatggaaaaggtgttgtttgcacacttcatgagggagacgactttggaaaactcgct
ctagtcaacgatgccccccgagctgcctccattgtcctgcgagaggacaactgtcacttc
ctgagagtcaacaaggaagacttcaacaggattttaagggacgtggaggccaacacagtg
cgtctgaaagagcacggtcaggatgttctggtgttagagaagagtcttggcagcagtcga
acctccaaccatggagcctcgtcctcccattacaaatacaaggtcatgtcagggactcca
gagaagattttggagcaccttcttgaaatgatgcgattggattctctattcacagagtca
gactcagccttagatgactatgtgctcatgcattgtgtcttcatcccaaacagtcaacta
tgtccggtgctgatggcccactaccatgccctggcctcgcagggctctgaacaggagaag
ctggactatactcttaacaacaagcgcagggtgatccgcctggtgatgcagtgggctgct
gttcatggagatcacctgcaggaggaggattcctctgtggctttcctaaaggagtttctc
atggctgtatctaatgatgccaaagcaattccagacctcagggatcaattaacagaactc
gagagaagtgtaaagcgaaacactgaagaggccagagtctcacagaaaaagcacaaagtc
ctactgcgtcagtttagtatgggggatgagaagcttcagaaacgtcagcccatcaagagc
aatgatgaaattctgctcaaagtctactgctgtgaccacacctacacaacaatccgtgtc
cctgtggctgcctcagtaagggaggtcatcggtgctgtggccgacaagctggggtcagcg
gaggacctgctcctggtcaacctcagttcgacaggagagaaagtcatcttcaagcccaat
gatgtttcagtgttctccactcttagcattaatggacggttgtttgccagccgcagggat
cagttggattctttgacccctctacccgagcaggagggttcctctacaggtctgttggcc
ggttttgagttaatgagctctaaggatgtggcttaccacatgacttcctatgactgggag
ctctttcactgtgtacatgagcttgaactcatctaccatacatttgggaggcaaaatgtc
aagaaaaccacagtgaacctggacctgttcctgaggaggtttaatgaaattcagttttgg
gtgatcacagagatgtgtctgtgttctcagcttaacaagagggtgcagcttttaaaaaag
ttcatcaagattgcagcccactgcaaagagtacaggaatctgaatgccttctttgctatc
attatgggactgagtaacccggctgtgtgcagattgaggcagacctgggagaaacttccc
aacaaattcaagaagttttattcggaatttgaaaacttcatggacccgtccaggaaccac
cgggcgtaccgactgacagttgccaagctggaacctcccatcattcctttcatgccgctg
ctaatcaaagacatgacattcactcacgagggcaacaagacgtttattgactatttggtc
aattttgagaaaatgcggatgatcgctaacactgtgaagatagtgagatactgtaggagc
cagccatttagtccagattcacctctggctagcaagaacccagaagttcggacttatgta
cgtcaactcaacgtgatcgacaaccaaaggacgctatctcagctctctcatggacttgag
ccccgcaggtcttaa
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integrated database retrieval system
