Etheostoma cragini (Arkansas darter): 117952974
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Entry
117952974 CDS
T07493
Symbol
actb1
Name
(RefSeq) actin, cytoplasmic 1
KO
K05692
actin beta/gamma 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03082
ATP-dependent chromatin remodeling
ecra04145
Phagosome
ecra04210
Apoptosis
ecra04510
Focal adhesion
ecra04520
Adherens junction
ecra04530
Tight junction
ecra04810
Regulation of actin cytoskeleton
ecra04814
Motor proteins
ecra04820
Cytoskeleton in muscle cells
ecra05100
Bacterial invasion of epithelial cells
ecra05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117952974 (actb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117952974 (actb1)
09143 Cell growth and death
04210 Apoptosis
117952974 (actb1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117952974 (actb1)
04520 Adherens junction
117952974 (actb1)
04530 Tight junction
117952974 (actb1)
09142 Cell motility
04814 Motor proteins
117952974 (actb1)
04820 Cytoskeleton in muscle cells
117952974 (actb1)
04810 Regulation of actin cytoskeleton
117952974 (actb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117952974 (actb1)
05100 Bacterial invasion of epithelial cells
117952974 (actb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecra03021
]
117952974 (actb1)
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117952974 (actb1)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117952974 (actb1)
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117952974 (actb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecra04812
]
117952974 (actb1)
04147 Exosome [BR:
ecra04147
]
117952974 (actb1)
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117952974 (actb1)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
117952974 (actb1)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
117952974 (actb1)
NuA4 complex
117952974 (actb1)
Chromatin remodeling factors
BAF complex
117952974 (actb1)
PBAF complex
117952974 (actb1)
GBAF(ncBAF) complex
117952974 (actb1)
SWR1 complex
117952974 (actb1)
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
117952974 (actb1)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
117952974 (actb1)
Exosome [BR:
ecra04147
]
Exosomal proteins
Proteins found in most exosomes
117952974 (actb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
117952974
NCBI-ProteinID:
XP_034741551
LinkDB
All DBs
Position
2:complement(24996120..25000025)
Genome browser
AA seq
375 aa
AA seq
DB search
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaaatcgccgccctcgttgttgacaacggatccggtatgtgcaaagctggc
tttgcaggagatgatgctccacgtgctgtgttcccctccattgttggacgtcccagacat
cagggtgtgatggttggtatgggccagaaagatagctacgttggtgacgaggcacagagc
aaaaggggtatcctgaccctgaagtaccccattgagcatggtattgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagttgcccctgaagag
caccctgtcctgctcacagaggctcccctgaaccccaaggccaacagggaaaagatgacc
cagatcatgttcgagaccttcaacactcccgccatgtatgtggccatccaggctgtgctg
tccctgtacgcctctggtcgtaccactggtattgtcatggactccggtgatggtgtcacc
cacacagtgcccatctatgaaggttatgccctgccccatgccatcctcaggttggacctg
gctggcagagacctcacagactacctcatgaagatcctgactgagaggggttacagcttc
accaccacagctgagcgtgaaattgtgcgtgacattaaggagaagctgtgttatgttgca
ctggactttgagcaagaaatgggcactgctgcctcctcttcatccctggagaagagctac
gagctgcctgacggacaggtcatcaccattggaaatgagaggttccgttgccccgaggcc
ctcttccagccttctttccttggtatggagtcttgcggtattcatgaaactaccttcaac
agcatcatgaagtgtgatgtggacatccgtaaggacctgtacgccaacactgtcctctct
ggcggtaccaccatgtaccctggcattgctgaccgtatgcagaaggaaatcactgccctg
gcacccaccaccatgaagatcaagatcattgctcccccagagaggaagtattctgtatgg
attggtggctccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgaatccggccccagcattgtccacaggaagtgcttctaa
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integrated database retrieval system