KEGG   Etheostoma cragini (Arkansas darter): 117952974
Entry
117952974         CDS       T07493                                 
Symbol
actb1
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03082  ATP-dependent chromatin remodeling
ecra04145  Phagosome
ecra04210  Apoptosis
ecra04510  Focal adhesion
ecra04520  Adherens junction
ecra04530  Tight junction
ecra04810  Regulation of actin cytoskeleton
ecra04814  Motor proteins
ecra04820  Cytoskeleton in muscle cells
ecra05100  Bacterial invasion of epithelial cells
ecra05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117952974 (actb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117952974 (actb1)
  09143 Cell growth and death
   04210 Apoptosis
    117952974 (actb1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117952974 (actb1)
   04520 Adherens junction
    117952974 (actb1)
   04530 Tight junction
    117952974 (actb1)
  09142 Cell motility
   04814 Motor proteins
    117952974 (actb1)
   04820 Cytoskeleton in muscle cells
    117952974 (actb1)
   04810 Regulation of actin cytoskeleton
    117952974 (actb1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117952974 (actb1)
   05100 Bacterial invasion of epithelial cells
    117952974 (actb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecra03021]
    117952974 (actb1)
   03019 Messenger RNA biogenesis [BR:ecra03019]
    117952974 (actb1)
   03036 Chromosome and associated proteins [BR:ecra03036]
    117952974 (actb1)
   03029 Mitochondrial biogenesis [BR:ecra03029]
    117952974 (actb1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ecra04812]
    117952974 (actb1)
   04147 Exosome [BR:ecra04147]
    117952974 (actb1)
Transcription machinery [BR:ecra03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     117952974 (actb1)
Messenger RNA biogenesis [BR:ecra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     117952974 (actb1)
Chromosome and associated proteins [BR:ecra03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     117952974 (actb1)
    NuA4 complex
     117952974 (actb1)
  Chromatin remodeling factors
   BAF complex
    117952974 (actb1)
   PBAF complex
    117952974 (actb1)
   GBAF(ncBAF) complex
    117952974 (actb1)
   SWR1 complex
    117952974 (actb1)
Mitochondrial biogenesis [BR:ecra03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    117952974 (actb1)
Cytoskeleton proteins [BR:ecra04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     117952974 (actb1)
Exosome [BR:ecra04147]
 Exosomal proteins
  Proteins found in most exosomes
   117952974 (actb1)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 117952974
NCBI-ProteinID: XP_034741551
LinkDB
Position
2:complement(24996120..25000025)
AA seq 375 aa
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgacgaaatcgccgccctcgttgttgacaacggatccggtatgtgcaaagctggc
tttgcaggagatgatgctccacgtgctgtgttcccctccattgttggacgtcccagacat
cagggtgtgatggttggtatgggccagaaagatagctacgttggtgacgaggcacagagc
aaaaggggtatcctgaccctgaagtaccccattgagcatggtattgtcaccaactgggac
gacatggagaagatctggcatcacaccttctacaacgagctgagagttgcccctgaagag
caccctgtcctgctcacagaggctcccctgaaccccaaggccaacagggaaaagatgacc
cagatcatgttcgagaccttcaacactcccgccatgtatgtggccatccaggctgtgctg
tccctgtacgcctctggtcgtaccactggtattgtcatggactccggtgatggtgtcacc
cacacagtgcccatctatgaaggttatgccctgccccatgccatcctcaggttggacctg
gctggcagagacctcacagactacctcatgaagatcctgactgagaggggttacagcttc
accaccacagctgagcgtgaaattgtgcgtgacattaaggagaagctgtgttatgttgca
ctggactttgagcaagaaatgggcactgctgcctcctcttcatccctggagaagagctac
gagctgcctgacggacaggtcatcaccattggaaatgagaggttccgttgccccgaggcc
ctcttccagccttctttccttggtatggagtcttgcggtattcatgaaactaccttcaac
agcatcatgaagtgtgatgtggacatccgtaaggacctgtacgccaacactgtcctctct
ggcggtaccaccatgtaccctggcattgctgaccgtatgcagaaggaaatcactgccctg
gcacccaccaccatgaagatcaagatcattgctcccccagagaggaagtattctgtatgg
attggtggctccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgaatccggccccagcattgtccacaggaagtgcttctaa

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